Parental gene:

RAB11A, ENSBTAG00000018959

Aliases:None
Description:ras-related protein Rab-11A [Source:RefSeq peptide;Acc:NP_001033251]
Organism:Cow (Bos taurus)
Coordinates:10:12691045..12710296(+)


>ENSBTAG00000018959
ATGGGCACCCGCGACGACGAGTACGACTACCTCTTCAAAGTTGTTCTTATTGGAGATTCTGGTGTTGGAAAGAGTAATCT
CCTGTCTCGATTTACTCGAAATGAGTTTAATCTTGAAAGCAAGAGCACCATTGGAGTAGAGTTTGCAACAAGAAGCATCC
AGGTTGATGGGAAAACAATAAAGGCACAGATATGGGACACGGCAGGGCAAGAACGATACCGCGCTATAACATCAGCATAC
TATCGTGGAGCTGTAGGTGCCTTATTGGTTTATGACATTGCTAAACATCTCACATATGAAAATGTAGAGCGATGGCTGAA
AGAACTAAGAGATCACGCTGATAGTAACATTGTTATCATGCTTGTGGGCAATAAGAGTGATTTGCGCCATCTCAGGGCAG
TTCCTACAGATGAAGCAAGAGCTTTTGCAGAAAAAAATGGTTTGTCATTCATTGAGACATCTGCTCTAGACTCTACAAAT
GTGGAAGCTGCTTTTCAGACAATCTTGACAGAGATATACCGCATTGTTTCTCAGAAGCAAATGTCAGACAGACGTGAAAA
TGACATGTCTCCAAGCAACAACGTGGTTCCTATTCATGTTCCACCAACCACTGAAAACAAGCCAAAGGTGCAGTGCTGTC
AGAACATATAA

Library Parental gene expression (RPM)
ERP005899_liver 22 .78 RPM
ERP005899_muscle 80 .19 RPM
SRP017611_brain 36 .77 RPM
SRP017611_kidney 76 .70 RPM
SRP017611_liver 16 .84 RPM
SRP030211_testis 45 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000044207 within_species_paralog 1 retrogene
retro_btau_991,
Callithrix jacchus ENSCJAG00000007333 ortholog_one2one 1 retrogene
retro_cjac_1050,
Echinops telfairi ENSETEG00000004920 ortholog_one2one 5 retrogenes
retro_etel_1150, retro_etel_2132, retro_etel_2214, retro_etel_694, retro_etel_837,
Homo sapiens ENSG00000103769 ortholog_one2one 1 retrogene
retro_hsap_715,
Gorilla gorilla ENSGGOG00000014252 ortholog_one2one 2 retrogenes
retro_ggor_538, retro_ggor_605,
Myotis lucifugus ENSMLUG00000008820 ortholog_one2one 2 retrogenes
retro_mluc_1606, retro_mluc_2435,
Macaca mulatta ENSMMUG00000008006 ortholog_one2one 1 retrogene
retro_mmul_2463,
Nomascus leucogenys ENSNLEG00000012853 ortholog_one2one 1 retrogene
retro_nleu_467,
Petromyzon marinus ENSPMAG00000009335 ortholog_one2many 1 retrogene
retro_pmar_25,
Pongo abelii ENSPPYG00000006573 ortholog_one2one 1 retrogene
retro_pabe_618,
Pan troglodytes ENSPTRG00000007188 ortholog_one2one 1 retrogene
retro_ptro_510,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1850 85.98 99.07
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Download FASTA sequences of all ENSBTAG00000018959 retrocopies