Parental gene:

BT.64411, ENSBTAG00000017557

Aliases:None
Description:glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial [Source:RefSeq peptide;Acc:NP_001039801]
Organism:Cow (Bos taurus)
Coordinates:9:43793888..43832666(-)


>ENSBTAG00000017557
ATGTTGGGCCGGACCCTGCGAGAAGTTTCTGTGGCACTGAAACAAGGCCAGATCACGCCAACTGAGCTCTGTCAAAGATG
TCTCTCCCTTATCAAGAAGACTAAGTTTCTAAATGCATACATTACTGTATCAGAAGAAGTGGCCTTAAAGCAAGCTGAAG
AATCAGAGAAAAGATATAAGAAAGGTCACTCACTGGGAGATTTAGATGGAATTCCTATTGCAGTAAAAGATAACTTTAGT
ACATCCGGCATTGAGACAACCTGTGCATCAAACATGCTGAAAGGTTATGTACCACCTTATAATGCCACAGTAGTTCAGAA
GTTGTTGGATCAGGGAGCTCTGCTAATGGGAAAAACAAACTTAGATGAGTTTGCTATGGGATCTGGAAGCACAGATGGCA
TATTTGGACCAGTTAAAAACCCGTGGAGTTATTCAAAACAATATAGAGAAAAGAGGAAGCAAAACTCTCACAGTGAGAAT
GAGGATTCAAATTGGCTTATAACCGGAGGAAGCTCAGGAGGAAGTGCAGCGGCCGTGTCAGCGTTCACGTGCTTTGCGGC
TTTAGGATCAGATACGGGAGGATCAACCAGAAATCCAGCTGCCCACTGCGGGGTTGTTGGTTTAAAACCAAGCTATGGCC
TAGTTTCTCGTCATGGTCTCATTCCCCTGGTGAATTCAATGGATGTGCCAGGAATCTTAACCAGATGTGTGGATGATGCA
GCCACTGTGTTGGGTGTACTAGCTGGGCATGATCCCAAAGATTCTACCACAATTCAAGATCCTGTTAAACCATTTACGCT
TCCCAGTTTGACAGATGTGAGCAAACTATGTATAGGAATTCCAAAGGAGTATCTTACGCCAGAATTGTCAAGTGAAGTAC
AATCTCTTTGGTCCAAAGCTGCTAATCTCTTTGAGTCTGAGGGGGCCAAAGTAACTGAAGTCTCCCTGCCCCATACCAGC
TACTCAATTGTGTGCTACCACGTATTGTGCACGTCGGAAGTGGCATCGAATATGGCCAGATTTGATGGGCTAGAATATGG
TCACAGATGTGATAGTGATGTGTCTACTGAAGCCATGTATGCTGCAACCAGGCGAGAAGGGTTCAATGATGTGGTGAGAG
GGAGAATCCTCTCAGGAAACTTTTTCCTATTAAAAGAAAATTATGAGAATTATTTTGTCAAAGCACAGAAAGTGAGACGG
CTCATTGCTAATGATTTTGTTAATGTTTTTAACTCTGGAGTGGACGTGCTGCTAACTCCCACGACCTTGAGTGAGGCAGT
GCCGTACACAGAGTTCATCAAGGAAGACAACAGGACGCGCAGCGCCCAAGACGACATCTTTACACAGGCCGTGAATATGG
CAGGACTGCCAGCAGTGAGTGTCCCTGTGGCCCTCTCAAGCCAAGGGTTGCCAATAGGACTGCAGTTTATTGGACGTGCA
TTTTGTGACCAGCAGCTTCTTATAGTTGCCAAATGGTTTGAAAAACAAGTCCAGTTTCCTGTTATTCAACTTCAAGAACT
AATGGATGATTGTTCATCAGTCTTTGAAAATGAAAAGTTGGCTTCTGTTTCTCTAAAATAG

Library Parental gene expression (RPM)
ERP005899_liver 12 .98 RPM
ERP005899_muscle 20 .90 RPM
SRP017611_brain 12 .01 RPM
SRP017611_kidney 24 .83 RPM
SRP017611_liver 9 .89 RPM
SRP030211_testis 27 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001036 ortholog_one2one 1 retrogene
retro_chof_2382,
Callithrix jacchus ENSCJAG00000006200 ortholog_one2one 4 retrogenes
retro_cjac_1421, retro_cjac_3781, retro_cjac_3919, retro_cjac_692,
Cavia porcellus ENSCPOG00000021670 ortholog_one2one 1 retrogene
retro_cpor_179,
Homo sapiens ENSG00000130348 ortholog_one2one 3 retrogenes
retro_hsap_1321, retro_hsap_466, retro_hsap_514,
Gorilla gorilla ENSGGOG00000008261 ortholog_one2one 3 retrogenes
retro_ggor_1031, retro_ggor_445, retro_ggor_474,
Macaca mulatta ENSMMUG00000008330 ortholog_one2many 2 retrogenes
retro_mmul_429, retro_mmul_675,
Nomascus leucogenys ENSNLEG00000013383 ortholog_one2one 2 retrogenes
retro_nleu_1403, retro_nleu_1550,
Pongo abelii ENSPPYG00000016883 ortholog_one2one 3 retrogenes
retro_pabe_1100, retro_pabe_230, retro_pabe_268,
Pan troglodytes ENSPTRG00000018462 ortholog_one2one 2 retrogenes
retro_ptro_351, retro_ptro_902,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_476 72.93 58.37
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2. retro_btau_493 75.63 88.40
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3. retro_btau_616 74.95 92.40
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Download FASTA sequences of all ENSBTAG00000017557 retrocopies