Parental gene:

DNAJA2, ENSBTAG00000003757

Aliases:None
Description:DnaJ homolog subfamily A member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q2HJ94]
Organism:Cow (Bos taurus)
Coordinates:18:15431045..15442609(-)


>ENSBTAG00000003757
ATGGCGAACGTGGCCGACACGAAACTGTACGACATCCTGGGCGTCCCGCCTGGAGCCAGCGAGAACGAGCTGAAGAAGGC
ATACAGAAAGTTAGCCAAAGAATACCATCCTGATAAGAATCCAAATGCTGGTGACAAATTCAAAGAAATAAGCTTTGCAT
ATGAAGTACTATCAAATCCTGAGAAGCGCGAACTATATGACAGATATGGAGAACAAGGTCTTCGGGAAGGTAGCGGTGGA
GGTGGTGGCATGGATGATATTTTCTCTCACATCTTTGGTGGAGGATTATTTAGCTTTATGGGTAATCAGAGCAGAAGTCG
AAATGGCAGAAGAAGAGGAGAAGACATGATGCATCCACTCAAAGTATCTTTAGAAGACCTGTATAATGGCAAGACAACCA
AACTACAGCTTAGCAAGAATGTACTCTGTAGTGCATGCAGTGGCCAAGGTGGGAAGTCTGGAGCTGTTCAGAAGTGTAGT
GCTTGTCGGGGTCGAGGTGTCCGCATCATGATCAGACAGCTGGCTCCAGGGATGGTGCAGCAGATGCAGTCTGTGTGTTC
TGACTGTAATGGAGAAGGAGAGGTAATTAATGAAAAGGACCGCTGTAAAAAATGTGAAGGGAAGAAAGTGATTAAAGAAG
TCAAGATTCTTGAAGTCCACGTAGACAAAGGCATGAAACATGGACAGAGAATTACATTTACTGGGGAAGCAGACCAGGCC
CCAGGAGTGGAACCAGGAGACATTGTTCTTTTGCTACAAGAAAAAGAGCATGAGGTGTTCCAGAGAGACGGGAATGATTT
GCACATGACATATAAGATAGGACTTGTTGAAGCTCTTTGTGGGTTTCAGTTCACATTTAAGCACCTTGATGGACGTCAGA
TTGTGGTGAAATACCCCCCTGGCAAAGTAATTGAACCAGGATGTGTTCGTGTAGTTCGAGGTGAAGGAATGCCACAATAT
CGTAATCCCTTTGAAAAAGGTGATCTTTACATAAAGTTTGATGTGCAGTTTCCTGAAAACAACTGGATCAACCCAGATAA
ACTTTCTGAATTAGAAGATCTTCTGCCATCTAGACCAGAAGTTCCAAATATTATTGGAGACACTGAGGAGGTAGAGCTTC
AAGAATTTGATAGCACACGGGGCTCAGGAGGCGGCCAGAGGCGTGAAGCCTATAATGATAGCTCTGATGAAGAAAGCAGT
AGCCATCATGGACCAGGAGTGCAATGCGCCCATCAGTAA

Library Parental gene expression (RPM)
ERP005899_liver 38 .14 RPM
ERP005899_muscle 71 .27 RPM
SRP017611_brain 53 .17 RPM
SRP017611_kidney 45 .11 RPM
SRP017611_liver 38 .43 RPM
SRP030211_testis 124 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016265 within_species_paralog 6 retrogenes
retro_btau_1440, retro_btau_1599, retro_btau_1800, retro_btau_1826, retro_btau_574, retro_btau_828,
Cavia porcellus ENSCPOG00000006955 ortholog_one2one 1 retrogene
retro_cpor_1466,
Dasypus novemcinctus ENSDNOG00000013794 ortholog_one2one 1 retrogene
retro_dnov_40,
Macaca mulatta ENSMMUG00000002247 possible_ortholog 1 retrogene
retro_mmul_36,
Oryctolagus cuniculus ENSOCUG00000004839 ortholog_one2one 1 retrogene
retro_ocun_1126,
Rattus norvegicus ENSRNOG00000016251 ortholog_one2one 1 retrogene
retro_rnor_2778,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_798 88.20 90.53
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2. retro_btau_1215 92.25 100.00
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3. retro_btau_1625 98.79 100.00
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Download FASTA sequences of all ENSBTAG00000003757 retrocopies