Parental gene:

DNAJA2, ENSCPOG00000006955

Aliases:None
Description:Chaperone protein DnaJ [Source:UniProtKB/TrEMBL;Acc:H0V901]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_33:6645989..6668699(+)


>ENSCPOG00000006955
ATGGCGAACGTGGCCGACACGAAGCTGTACGACATCCTGGGTGTCCCGCCCGGCGCCAGCGAGAACGAGCTGAAGAAGGC
ATACAGAAAGTTAGCCAAGGAGTATCATCCTGATAAGAATCCAAATGCTGGAGACAAATTTAAAGAAATAAGTTTTGCAT
ATGAAGTATTGTCAAATCCAGAGAAACGCGAGTTATATGACAGATATGGAGAACAAGGTCTTCGGGAAGGTAGCGGTGGA
GGTGGCGGCATGGATGATATTTTCTCTCACATTTTTGGTGGAGGATTATTTGGCTTTATGGGCAATCAGAGTAGAAGTCG
AAACGGCAGGAGAAGAGGCGAAGACATGATGCATCCACTCAAAGTATCCTTAGAAGATCTGTATAATGGCAAAACAACCA
AACTACAACTTAGCAAGAATGTACTCTGTAGTGCATGCAGTGGTCAAGGTGGAAAATCTGGAGCTGTCCAGAAATGTAGT
GCTTGCCGAGGTCGAGGTGTTCGCATTATGATCAGACAACTGGCTCCAGGAATGGTGCAGCAGATGCAGTCTGTATGCTC
TGACTGTAATGGAGAAGGAGAGGTAATTAATGAAAAGGACCGCTGTAAAAAATGTGAAGGGAAGAAGGTGATTAAAGAAG
TCAAGATTCTTGAAGTTCATGTAGACAAAGGCATGAAACATGGACAGAGAATTACATTCACTGGGGAGGCAGACCAGGCC
CCAGGAGTGGAGCCAGGAGACATTGTTCTTTTGCTGCAGGAGAAAGAACATGAGGTGTTCCAGAGAGATGGGAATGATTT
GCACATGACTTACAAGATAGGACTTGTTGAAGCTCTATGTGGATTTCAGTTCACTTTTAAGCACCTTGATGGCCGTCAGA
TTGTGGTGAAATACCCCCCTGGCAAAGTAATTGAACCAGGATGTGTTCGTGTAGTCCGAGGTGAAGGAATGCCTCAGTAT
CGTAATCCTTTTGAAAAAGGTGATCTGTACATAAAGTTTGATGTGCAGTTTCCTGAAAACAACTGGATCAACCCAGATAA
GCTTTCTGAGTTAGAAGATCTTCTGCCATCTAGACCAGAGGTTCCTAACATAATTGGAGAAACCGAGGAGGTAGAGCTTC
AGGAGTTTGACAGCACTCGAGGCTCTGGAGGTGGTCAGAGGCGGGAAGCCTATAATGATAGCTCTGATGAAGAGAGCAGC
AGCCATCACGGGCCTGGGGTGCAGTGTGCCCACCAGTAA

Library Parental gene expression (RPM)
SRP017611_brain 61 .89 RPM
SRP017611_kidney 59 .67 RPM
SRP017611_liver 32 .04 RPM
SRP040447_lung 45 .65 RPM
SRP040447_skeletal_muscle 56 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003757 ortholog_one2one 3 retrogenes
retro_btau_1215, retro_btau_1625, retro_btau_798,
Cavia porcellus ENSCPOG00000000462 within_species_paralog 6 retrogenes
retro_cpor_1456, retro_cpor_225, retro_cpor_386, retro_cpor_396, retro_cpor_561, retro_cpor_781,
Dasypus novemcinctus ENSDNOG00000013794 ortholog_one2one 1 retrogene
retro_dnov_40,
Macaca mulatta ENSMMUG00000002247 possible_ortholog 1 retrogene
retro_mmul_36,
Oryctolagus cuniculus ENSOCUG00000004839 ortholog_one2one 1 retrogene
retro_ocun_1126,
Rattus norvegicus ENSRNOG00000016251 ortholog_one2one 1 retrogene
retro_rnor_2778,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1466 95.87 99.76
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Download FASTA sequences of all ENSCPOG00000006955 retrocopies