Parental gene:

BT.81335, ENSBTAG00000002415

Aliases:None
Description:Tetraspanin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q3SZR9]
Organism:Cow (Bos taurus)
Coordinates:21:32706741..32719331(-)


>ENSBTAG00000002415
GGAGCCGCTGGCATTTTATGCTATGTTGGAGCCTATGTCTTCATCACTTACGACGACTATGACCACTTCTTTGAAGATGT
GTACACTCTCATCCCTGCTGTGGTGATCATAGCTGTTGGGGCCCTGCTCTTCATTATTGGGCTAATTGGTTGCTGTGCCA
CAATCCGGGAAAGCCGCTGTGGACTTGCCACGTTTGTCATCATCCTACTCTTGGTTTTTGTCACAGAAGTTGTTGTTGTG
GTTTTGGGATATGTTTACAGAGCAAAGGTGGAAAATGAAGTTGATCGCAGCATTCAGAAGGTATATAAGACCTACAATGG
AACCAACCCTGATGCTGCTAGCCGGGCCATTGACTATGTTCAGAGACAGCTGCACTGTTGTGGAATTCACAACTATTCAG
ACTGGGAAAATACAGACTGGTTTAAAGAAACAAAAAACCAGAGCGTCCCTCTTAGTTGTTGCAGAGAGACAGCCAGCAGC
TGTAACGGCAGTCTGGCCAACCCCTCTGATCTTTATGCTGAGGGGTGTGAGGCTCTGGTTGTGAAGAAGCTACAAGAAAT
CATGATGCATGTTATCTGGGCAGCATTGGCATTTGCAGCTATTCAGCTGCTGGGCATGCTGTGTGCCTGCATCGTGTTGT
GCAGAAGGAGTAGAGATCCTGCCTATGAGCTCCTCATCACCGGCGGAGCCTATGCATAG

Library Parental gene expression (RPM)
ERP005899_liver 52 .41 RPM
ERP005899_muscle 224 .88 RPM
SRP017611_brain 63 .54 RPM
SRP017611_kidney 51 .15 RPM
SRP017611_liver 72 .41 RPM
SRP030211_testis 96 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009727 ortholog_one2one 1 retrogene
retro_amel_1275,
Bos taurus ENSBTAG00000011931 within_species_paralog 1 retrogene
retro_btau_234,
Canis familiaris ENSCAFG00000018068 ortholog_one2one 2 retrogenes
retro_cfam_1391, retro_cfam_571,
Choloepus hoffmanni ENSCHOG00000003785 ortholog_one2one 2 retrogenes
retro_chof_162, retro_chof_1682,
Dasypus novemcinctus ENSDNOG00000005619 ortholog_one2one 3 retrogenes
retro_dnov_1371, retro_dnov_1520, retro_dnov_1616,
Echinops telfairi ENSETEG00000010916 ortholog_one2one 1 retrogene
retro_etel_872,
Felis catus ENSFCAG00000025746 ortholog_one2one 1 retrogene
retro_fcat_1860,
Mustela putorius furo ENSMPUG00000017332 ortholog_one2one 2 retrogenes
retro_mputfur_1641, retro_mputfur_1651,
Pteropus vampyrus ENSPVAG00000004662 ortholog_one2one 1 retrogene
retro_pvam_394,
Ictidomys tridecemlineatus ENSSTOG00000005615 ortholog_one2one 1 retrogene
retro_itri_1268,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1089 94.85 100.00
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2. retro_btau_1650 95.26 100.00
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Download FASTA sequences of all ENSBTAG00000002415 retrocopies