Parental gene:

GTSF1L, ENSACAG00000029590

Aliases:None
Description:gametocyte specific factor 1-like [Source:HGNC Symbol;Acc:16198]
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL343252.1:327710..344621(-)


>ENSACAG00000029590
ATGGATCCGGAAACACTCTTGCAGTGCCCCTATGACAAGAACCACCAGATCAGAGCCTCCAGGTTCCCTTATCATTTGGT
GAAATGCAAAAAGAACAACCAAAAGATTGCCAAACAACTAGCAACGTGCCCCTACAATGCCCGTCACAGAATTCCTAAGG
ACGAGTTCAACTTTCACATTGAAATCTGCGAAAGTAAAATTTCCCTTGAAGTGAATAAAGCTGCCGTAAAGAATGGAAGC
AAAGAAAAGACAGCCTCGAAATGCCCCTCTCCACAGGAAGACTGGGAAGATGATGCTGACAAAACTCCTACCCGTCCTTT
TGTATTTGGTGCCAGCATTTCAGAGAATGGCATCTAG

Library Parental gene expression (RPM)
SRP009831_adrenal 3 .58 RPM
SRP009831_brain 0 .38 RPM
SRP009831_dewlap 43 .03 RPM
SRP009831_embryo 1 .01 RPM
SRP009831_heart 0 .26 RPM
SRP009831_liver 1 .10 RPM
SRP009831_lung 0 .65 RPM
SRP009831_ovary 36 .64 RPM
SRP009831_skeletal_muscle 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014260 within_species_paralog 3 retrogenes
retro_acar_135, retro_acar_143, retro_acar_92,
Ailuropoda melanoleuca ENSAMEG00000000958 ortholog_one2many 1 retrogene
retro_amel_91,
Cavia porcellus ENSCPOG00000023851 ortholog_one2many 1 retrogene
retro_cpor_93,
Felis catus ENSFCAG00000031316 ortholog_one2many 1 retrogene
retro_fcat_1,
Mustela putorius furo ENSMPUG00000005664 ortholog_one2many 1 retrogene
retro_mputfur_116,
Mus musculus ENSMUSG00000053508 ortholog_one2many 1 retrogene
retro_mmus_199,
Rattus norvegicus ENSRNOG00000036830 ortholog_one2one 1 retrogene
retro_rnor_1938,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_141 85.34 98.31
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Download FASTA sequences of all ENSACAG00000029590 retrocopies