RetrogeneDB ID: retro_nleu_12

Retrocopy location

• Organism: Gibbon (Nomascus leucogenys)
• Coordinates: GL397321.1:1915294..1921282(-)
• Located in intron of: None

Retrocopy information

• Ensembl ID: ENSNLEG00000001117
• Aliases: None
• Status: KNOWN_PROTEIN_CODING

Parental gene information

• Parental gene symbol: TTC3
• Ensembl ID: ENSNLEG00000004545
• Aliases: None
• Description: None

Sequence

>retro_nleu_12
ATGGCGGATTATGCCTTGTTAGAAGATTGCCCTTACGTGGACGATTGTGTCTTTGCTGCTGAATTTATGACTGATGATTA
TGTTCGTGTGACTCAGCTTTACTGTGATGGGGTGGGTATGCAATATAAAGATTATGTCCAAAGTGAGAGGAATTTAGAAT
TTGACATCTGCAGTATATGGTGTAGTAAACCAATTTCTGTCCTGCAAGATTATTGTGATGCCATTAAAATAAACATCTTC
TGGCCACTTCTGTTTCAACATCAAAACAGTTCTGTAATATCACGATTGCATCCCTGTGTGGACGCCAACAATTCACGTGC
TTCCGAGATAAATTTGAAGAGATTACAACATCTTGAGTTGATGGAAGATATTGTGGATTTGGCAAAGAAAGTTGCTAATG
ATTCACTCCTTATTGGAGGCTTATTGAGAATTGGTTATAAAATAGAAAATAAAATCTTGGCAATGGAAGAAGCTCTGAAT
TGGATAAAATATGCAGGCGATGTAACAATTCTAACTAAATTAGGATCAATTGACAATTGTTGGCCTATGTTAAGTATTTT
CTTTACTGAATACAAGTACCACATAACTAAAATTGTAATGGAAGACTGCAATTTGCTTGAAGAACTTAAAACCCAAAGTT
GTATGGATTGTATAGAGCAAGGAGAACTAATGAAAATGAAAGGAAATGAAGAGTTTTCCAAAGAAAGATTTGATATAGCT
ATTATCTATTACACCAGAGCCATTGAATATAGACCTGAAAACCACCTTCTTTATGGTAACCGAGCTCTTTGTTTTCTTCG
TACTGGACAATTTAGAAATGCACTCGGTGATGGAAAGAGAGCCACTATTCTGAAGAACACTTGGCCAAAGGGTCATTATC
GTTATTGTGATGCTCTTTCTATGCTGGGGGAATATAACTGGGCCCTGCAAGCAAACATAACAGCTCAAAAACTCTGTAAA
AATGACCCTGAGGGAATCAAGGATCTAATTCAGCAGCATGTAAATTTACAAAAACAAATAGAAGACCTACAAGGTCAAAC
AGCAAATAAGAATCCAATTAAAGCCTTTTATGAAAACAGGGCCTACACACCTAGGAGTTTATCAGCACCTGTATTTAGTA
CTTCACTTAACTTTGTGGAGACGGAAAGAGATTTCAGAAAAATTAATCACGAAATGGCCAACGGTGGTAATCAGAATCTA
AAGGTGATGGATGACGCATTGAAGATAGATGATTATGACTGTCATCCTGAATTTTCACCACCAACAAGTCAGCCTCCAAA
ACATAAAGGAAAACAAAAATCTCGAAACAATGAATCAGAGAAGTTCAGTTCTAGTTCACAATTGACTTTACCAGCAGATT
TGAAGAACATCTTGGAGAAACAGTTTTCTAAATCTTCCAGAGCTGCACACCAGGATTTTGCTAATATAATGACAATGCTG
AGAAGCTTAATTCAAGATGGCTATACAGCCTTATTGGAGCAGCGTTGCCGCAGTGCTGCACATGCCTTTACAGAGTTGCT
GAATGGTTTAGATCCTCAAAAAATAAAGCAATTAAACCTGGCCATGATTAACTATGTCTTGGTTGTCTATGGACTTGCCA
TTTCTCTCCTTGGAATAGGACAGCCTGAAGAACTATCTGAAGCTGAAAACCAGTTTAAGAGGATTATTGAACACTACCAC
AATGAGGGACTTGATTGCTTGGCCTACTGTGGAATTGGAAAAGTATATTTGAAGAAAAACAGATTTCTAGAAGCTCTCAA
TCACTTTGAGAAAGCAAGAACCTTGATTTATCGTCTTCCTGGAGTGTTAACTTGGCCCACAAGTAACGTGATTATTGAAG
AGTCTCAGCCGGAAAAAATAAAGATGCTGTTAGAGAAATTTGTTGAAGAATGCAAGTTCCCTCCAGTGCCAGATGCCATT
TGTTGCTATCAGAAGTGCTGTGGATATTCTAAGATCCAGATATACATAACTGATCCAGACTTTAAGGGTTTTATACGCAT
CAGCTGTTGCCAGTACTGTAAAATAGAATTTCACATGAATTGCTGGAAGAAGTTAAAAACTACAACCTTTAATGATAAAA
TTGACAAGGATTTTCTACAAGGAATATGTCTTACCCCTGACTGTGAAGGTGTCATTTCTAAGATTATCATCTTCAGCAGT
GGTGGTCAAGTTAAATGTGAATTTGAACACAAGGTCATAAAAGAAAAGGTTCCTCCAAGACCTATTCTGAAACAGAAATG
TTCTAGCCTAGAGAAACTAAGACTGAAAGAAGACAAAAAATTGAAGAGAAAGATCCAAAAAAAAGAAGCAAAAAAATTAG
CACAAGAAAGAATGGAGGAGGACTTAAGAGAAAGTAATCCACCCAAAAACGAAGAGCAGAAAGAAACTGTAGACAATGTT
CTGCATTGTCAGTTCCTTGATGACAGAATTCTACAGTGTATAAAGCAGTATGCTGACAAGATTAAATCCGGCATATGGAA
TACAGCCACGCTTCTCAAAGAATTGCTTTCTTGGAAAGTTTTGAGCACAGAGGACTATACCACCTGTTTTTCAAGCAGAA
ATTTTCTAAATGAAGCAGTGGACTATGTTATTTGTCACTTGATTCAAGAAAAGAACAGAGTAAAGACAAGAATATTTCTG
CATGTTTTGAGTGAGCTTAAAGAAGTGGAGCCCAAATTAGCCGCCTGGATCCAAAAACTTAATAGCTTTGGCTTAGATGC
CACAGGACCTTTCTTTTCTCGGTATGAAGCATCTCTTAAACAGCTTGATTTTAGCATCATGACTTTCCTCTGGAATGAGA
AATATGGTCACAAACTAGACTCTATAGAAGGAAAGCAACTTGATTATTTCTTTGAGCCAACATCATTGAAGGAAGCCCGT
TGTTTAATATGGCTGCTAGAAGAACACAGAGACAAGTTCCCAGCATTACATAGTGCTTTAGATGAATTCTTTGATATAAT
GGACAGCCGCTGTACTGTGTTAAGGAAACAGGACAGTGGTGAAGCACCGTTTAGTTCTACCAAGGTGAAAAACAAAGGCA
AGAAAAAGAAACCAAAGGATTCAAAGCCTATGTTAGTTGGGTCTGGAACAACTTCAGTAACTCCAAATAATGAGATCATC
ATTTCAAGTGAAGACCATAGCAATCAAAATTCAGATACTGCAGGCCCATTTGCAGTGCCTGACCATCTTCGGCAAGACGT
AGAAGAATTTGAAGCTCTCTATGACCAACACAGTAATGAATATGTTGTCCGCAATAAGAAGCTATGGGACATGAACCCAA
AACAAAAATGTTCAACTCTATATGATTACTTCTCTCAGTTGTTGGAGGAACATGGTCCCTTGGACATGAGTCACAAGATG
TTCTCTGAAGAATATGAGTTTTTCCCAGAAGAAACTCGACCAATACTAGAAAAAGCAGGAGGTTTAAAATCTTTTCTCTT
GGGATGTCCTCGTTTTGTTGTGATTGACAACTGTATTGCATTGAAGAAAGTTGCATCACGGCTCAAGAAAAAAAGAAAGA
AGAAAAACATTAAAACAAAAGTAGAAGACATTTCAAAAGCAGGAGAATATTTACAAGTTAAACTACCACTGAATTCAGCT
GCTAGGGAATTTAAACCAGATGTAAAGTCTAAACCAGTATCAGGTTCATCTTCAGCACCAGGTTCTGAAGATGTGAAATC
CAAACCTGTGTCTGCAAATTCTCCCAAGCCAGCTTGTGAAGATGTGAAGGCCAAACCAGTATCCGATAATTCTTCTAGAC
AAGTTTCTGAGGATGGGAAACCCAAAGGGGTCTCTTCTAATTCTCCCAAACCAGGCACTGAGGATGCAAATTACAAGCGA
GTCTCCTCTAATTCTCCCAAACCGGTTCTTGAGGATGTGAAACCAACTTATTGGGCTCAATCCCATTTGGTCACAGGATA
CTGTACGTATCTTCCTTTCCAGAGATTTGATAACACCCGGACACCACCAGCATACATAAATGTGTTACCAGGTTTGCCCC
AGTACACCAGCATATATACACCCTTGGCCAGCCTTTCTCCTGAATATCAGCTACCAAGATCAGTACCAGTGGTGCCGACT
TTTGTAGCCAATGACAGAGCAGATAAAAATGCTATTGCCTATTTTGAGGGTCATCATTTGAATGCTGAGAATGCTGCTGG
TCACCAGATTGCCTCCGAAACACAGATCCTTGAGGATTCCTTGGTAATATCTGTAAAGTCACAGTGCAGCACGGGTGATG
CTCATACAGTCCTGAGTGAGTCTAACAGAAAAGATGGGCACTGTGGAAATTCTAACAACAAATGTGAAGTAATTCCAGAA
AGCACCAGTGCAGTAACCAACATTCCACAGGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAACACACCAAGAAGT
CAATACTGAGCCATATAATCCTTTTGAGAAACAACAAGGGGAAATTTCACGGATTGAAAAGGAGTACCAAGTATTACAAG
ACCAACTTAAAGAAGCGTATGAAAATTATGAGCAGATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAAAAG
TTGAAAAGGCACTTAGAAGAAAACAAGATATCAAAGACAGAATTAGGTTGGTTCCTTCAAGATTTGGAAAGAGAAATTAA
AAAATGGCAACAGGAAAAAAAAGAAATCCAAGAAACACTAAAATCACTGAAGAAGAAAATTAAAAAGGTTTCAAATGCCA
ATGAAATGTATACCCAGAAAAATGATGGAAAGGATAAGGAACATGAATTACATCTGGATCAGTCCCTTGAAATCAGCAAC
ACACTTACAAATGAGAAAATGAAAATAGAAGAGTGTATAAAGAAAGGAAAAGAGGATTATGAAGAGAGTCATCAGAGAGC
TGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAGTGTATAAGCTACAGATCATGGAGTCACAAGCAG
AAGCCTATCTGAAGAAGCTGGAGCTGATAAGCCATGATCCTGCAGCATATCCTGACATGGAGTCTGATATATGTTCATGG
GAATTGTTTCTTTCTAATGTTACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTAAGGCAATTAAAAA
TGGTTCTCGGCTCAGTGAACTTTCTAAAGTGCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACAAGGTTCATCCTGAGT
TACTTCCTGAGTCTTCAGGCCATGATGACCAAGGGCTGAAGACTTCTGCAAGCGATGTGACTGGAAACCACGCAGCACTT
CACAGGGATCCCAGTGTGTTCTCTGCCGGCGATTCCCCAGGGGAGGCTCCTTCTGTGCTGTTGCCAGGGCCACCCCCTTC
TCAGCCTGAAGCCACTCAGCTGCCAGGGCCAAAAGGGGCCGGCCAGGCAGCTCTGTCAGAGCAAAGCCCTGTGGCTGATC
AGAAGCAGCCTGTTCCTCCAGGATGTGCTGCATGTTCAAGCCAGTCTCCAAAAAAGCCATTCAATAGTATTATTGAGCAC
CTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGCTTGCTGGTTTTATTAAAAAAGTGCGAAGCAAAAACAAGAACTC
ACTTTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAACACATTCTAGATGAACAGAAAAAGAAAAAGCCAA
ACCCAGGAAAGGACAAGAGGACTTATGAGCCCAGCTCTGCCGCCCCCGTGACCAGGTCCTCCCAGGGCCCACCTTTGGCG
GTTGTTGCACCATCACCCAAAACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGGTTGCACCGGGTACAAGTTCCTG
TGAAATATGCCATGAGGTGTTCAAATCAAAAAACATGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGTTTTA
AGCAGTGGCTTAAAGGGCAGAGCACTTGCCCAGCCTGCCAGTCTCATGATCTCCTGTCAGAAGAGTAG

Alignment

ORF - retro_nleu_12 Open Reading Frame is conserved.

Retrocopy - Parental Gene Alignment summary:

• Percent Identity: 94.14 %
• Parental protein coverage: 98.52 %
• Number of stop codons detected: 0
• Number of frameshifts detected: 0

Retrocopy - Parental Gene Alignment:

Parental  VADYALLEDCPYVDDCVFAAEFTTNDYVRVTQLYCDGVGMQYKDYIQSERNLELDICSIWCSKPISVLQD
          .ADYALLEDCPYVDDCVFAAEF.T.DYVRVTQLYCDGVGMQYKDY.QSERNLE.DICSIWCSKPISVLQD
Retrocopy MADYALLEDCPYVDDCVFAAEFMTDDYVRVTQLYCDGVGMQYKDYVQSERNLEFDICSIWCSKPISVLQD

Parental  YCDAIKINIFWPLLFHHQNSSVISRLHPCVDANNSRASEINLKKLQHLELMEDIVDLAKKIANDSFLIGG
          YCDAIKINIFWPLLF.HQNSSVISRLHPCVDANNSRASEINLK.LQHLELMEDIVDLAKK.ANDS.LIGG
Retrocopy YCDAIKINIFWPLLFQHQNSSVISRLHPCVDANNSRASEINLKRLQHLELMEDIVDLAKKVANDSLLIGG

Parental  LLRIGCKIENKILAMEEALNWIKYAGDVTILTKLGSIDNCWHMLSIFFTEYKYHITKIVMEDCNLLEELE
          LLRIG.KIENKILAMEEALNWIKYAGDVTILTKLGSIDNCW.MLSIFFTEYKYHITKIVMEDCNLLEEL.
Retrocopy LLRIGYKIENKILAMEEALNWIKYAGDVTILTKLGSIDNCWPMLSIFFTEYKYHITKIVMEDCNLLEELK

Parental  TQSCMDCIEQGELMKMKGNEEFSKERFDIAIIYYTRAIEYRPENYLLYGNRALCFLRTGQFRNALGDGKR
          TQSCMDCIEQGELMKMKGNEEFSKERFDIAIIYYTRAIEYRPEN.LLYGNRALCFLRTGQFRNALGDGKR
Retrocopy TQSCMDCIEQGELMKMKGNEEFSKERFDIAIIYYTRAIEYRPENHLLYGNRALCFLRTGQFRNALGDGKR

Parental  ATILKNTWPKGHYRYCDALSMLGEYDWALQANIKAQKLCKNDPEGIKDLIQQHVKLQKQIEDLQGRTANK
          ATILKNTWPKGHYRYCDALSMLGEY.WALQANI.AQKLCKNDPEGIKDLIQQHV.LQKQIEDLQG.TANK
Retrocopy ATILKNTWPKGHYRYCDALSMLGEYNWALQANITAQKLCKNDPEGIKDLIQQHVNLQKQIEDLQGQTANK

Parental  DPIKAFYENRAYTPRSLSAPAFTTSLNFVERERDFRKINHEMASGGNQNLKVADEALKVDDCDCHPEFSP
          .PIKAFYENRAYTPRSLSAP.F.TSLNFVE.ERDFRKINHEMA.GGNQNLKV.D.ALK.DD.DCHPEFSP
Retrocopy NPIKAFYENRAYTPRSLSAPVFSTSLNFVETERDFRKINHEMANGGNQNLKVMDDALKIDDYDCHPEFSP

Parental  PSSQPPKHKGKQKSRNNESEKFSSSSPLTLPADLKNILEKQFSKSSRAAQQDFANIMKMLRSLIQDGYMA
          P.SQPPKHKGKQKSRNNESEKFSSSS.LTLPADLKNILEKQFSKSSRAA.QDFANIM.MLRSLIQDGY.A
Retrocopy PTSQPPKHKGKQKSRNNESEKFSSSSQLTLPADLKNILEKQFSKSSRAAHQDFANIMTMLRSLIQDGYTA

Parental  LLEQRCRSAAQAFTELLNGLDPQKIKQLNLAMINYVLVVYGLAISLLGIGQPEELSEAENQFKRIIEHYP
          LLEQRCRSAA.AFTELLNGLDPQKIKQLNLAMINYVLVVYGLAISLLGIGQPEELSEAENQFKRIIEHY.
Retrocopy LLEQRCRSAAHAFTELLNGLDPQKIKQLNLAMINYVLVVYGLAISLLGIGQPEELSEAENQFKRIIEHYH

Parental  NEGLDCLAYCGIGKVYLKKNRFLEALNHFEKARTLIYRLPGVLTWPTSNVIIEESKPQKIKMLLEKFVEE
          NEGLDCLAYCGIGKVYLKKNRFLEALNHFEKARTLIYRLPGVLTWPTSNVIIEES.P.KIKMLLEKFVEE
Retrocopy NEGLDCLAYCGIGKVYLKKNRFLEALNHFEKARTLIYRLPGVLTWPTSNVIIEESQPEKIKMLLEKFVEE

Parental  CKFPPVPDAICCYQKCHGYSKIQIYITDPDFKGFIRISCCQYCKIEFHMNCWKKLKTTTFNDKIDKDFLQ
          CKFPPVPDAICCYQKC.GYSKIQIYITDPDFKGFIRISCCQYCKIEFHMNCWKKLKTTTFNDKIDKDFLQ
Retrocopy CKFPPVPDAICCYQKCCGYSKIQIYITDPDFKGFIRISCCQYCKIEFHMNCWKKLKTTTFNDKIDKDFLQ

Parental  GICLTPDCEGVISKIIIFTSGGQVKCEFEHKVIKEKVPPRPILKQKCSSLEKLRLKEDKKLKRKIQKKEA
          GICLTPDCEGVISKIIIF.SGGQVKCEFEHKVIKEKVPPRPILKQKCSSLEKLRLKEDKKLKRKIQKKEA
Retrocopy GICLTPDCEGVISKIIIFSSGGQVKCEFEHKVIKEKVPPRPILKQKCSSLEKLRLKEDKKLKRKIQKKEA

Parental  KKLAQERMEEDLRESNPPKNEEQKETVDNVQHCQFLDDRILQCIKQYADKIKSGIQNTATLLKELLSWKV
          KKLAQERMEEDLRESNPPKNEEQKETVDNV.HCQFLDDRILQCIKQYADKIKSGI.NTATLLKELLSWKV
Retrocopy KKLAQERMEEDLRESNPPKNEEQKETVDNVLHCQFLDDRILQCIKQYADKIKSGIWNTATLLKELLSWKV

Parental  LSTEDYTTCFSSRNFLNEAVDYVIHHLIQEKNRVKTRIFLHVLSELKEVEPKLAAWIQKLNSFGLDATGT
          LSTEDYTTCFSSRNFLNEAVDYVI.HLIQEKNRVKTRIFLHVLSELKEVEPKLAAWIQKLNSFGLDATG.
Retrocopy LSTEDYTTCFSSRNFLNEAVDYVICHLIQEKNRVKTRIFLHVLSELKEVEPKLAAWIQKLNSFGLDATGP

Parental  FFSRYGASLKQLDFSIMTFLWNEKYGHKLDSIEGKQLDYFSEPASLKEARCLIWLLEEHRDKFPALHSAL
          FFSRY.ASLKQLDFSIMTFLWNEKYGHKLDSIEGKQLDYF.EP.SLKEARCLIWLLEEHRDKFPALHSAL
Retrocopy FFSRYEASLKQLDFSIMTFLWNEKYGHKLDSIEGKQLDYFFEPTSLKEARCLIWLLEEHRDKFPALHSAL

Parental  DEFFDIMDSRCTVLRKQDSGEALFSSTKVKNKGKKKKPKDSKPMLVGSGTTSVTPNNEIITSSEDHSSNR
          DEFFDIMDSRCTVLRKQDSGEA.FSSTKVKNKGKKKKPKDSKPMLVGSGTTSVTPNNEII.SSEDH.SN.
Retrocopy DEFFDIMDSRCTVLRKQDSGEAPFSSTKVKNKGKKKKPKDSKPMLVGSGTTSVTPNNEIIISSEDH-SNQ

Parental  NSDSAGPFAVPDHLRQDVEEFEALYDQHSNEYVVRNKKLWDMNPKQKCSTLYDYFSQFLEEHGPLDMSNK
          NSD.AGPFAVPDHLRQDVEEFEALYDQHSNEYVVRNKKLWDMNPKQKCSTLYDYFSQ.LEEHGPLDMS.K
Retrocopy NSDTAGPFAVPDHLRQDVEEFEALYDQHSNEYVVRNKKLWDMNPKQKCSTLYDYFSQLLEEHGPLDMSHK

Parental  MFSAEYEFFPEETRQILEKAGGLKPFLLGCPRFVVIDNCIALKKVASRLKKKRKKKNIKTKVEEISKAGE
          MFS.EYEFFPEETR.ILEKAGGLK.FLLGCPRFVVIDNCIALKKVASRLKKKRKKKNIKTKVE.ISKAGE
Retrocopy MFSEEYEFFPEETRPILEKAGGLKSFLLGCPRFVVIDNCIALKKVASRLKKKRKKKNIKTKVEDISKAGE

Parental  YVRVKLPLNPAAREFKPDVKSKPVSDSSSAPASEDVKPKPVSANSPKPACEDVKAKPVSDNSSRQVSDDG
          Y..VKLPLN.AAREFKPDVKSKPVS.SSSAP.SEDVK.KPVSANSPKPACEDVKAKPVSDNSSRQVS.DG
Retrocopy YLQVKLPLNSAAREFKPDVKSKPVSGSSSAPGSEDVKSKPVSANSPKPACEDVKAKPVSDNSSRQVSEDG

Parental  QPKGVSSNSPKPGSEDANYKRVSCNSPKPVLEDVKPTYWAQSHLLTGYCTYLPFQRFDITQTPPAYINVL
          .PKGVSSNSPKPG.EDANYKRVS.NSPKPVLEDVKPTYWAQSHL.TGYCTYLPFQRFD.T.TPPAYINVL
Retrocopy KPKGVSSNSPKPGTEDANYKRVSSNSPKPVLEDVKPTYWAQSHLVTGYCTYLPFQRFDNTRTPPAYINVL

Parental  PGLPQYTSIYTPLASLSPEYQLPRSVPVVPSFVANDRADKNAAAYFEGHHLNAENAAGHQIASETQILED
          PGLPQYTSIYTPLASLSPEYQLPRSVPVVP.FVANDRADKNA.AYFEGHHLNAENAAGHQIASETQILED
Retrocopy PGLPQYTSIYTPLASLSPEYQLPRSVPVVPTFVANDRADKNAIAYFEGHHLNAENAAGHQIASETQILED

Parental  SLGISVKSHCSTGDAHTVLIESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNT
          SL.ISVKS.CSTGDAHTVL.ESNR.D.HCGNSNNKCEVIPESTSAVTNIP.VQMVAIQVSWNI.HQEVNT
Retrocopy SLVISVKSQCSTGDAHTVLSESNRKDGHCGNSNNKCEVIPESTSAVTNIPQVQMVAIQVSWNITHQEVNT

Parental  EPYNPFEEQQGEISRIEKEHQVLQDQLQEAYENYEQIRLKGLEETRDLEEKLKRHLEENKISKTELDWFL
          EPYNPFE.QQGEISRIEKE.QVLQDQL.EAYENYEQI.LKGLEETRDLEEKLKRHLEENKISKTEL.WFL
Retrocopy EPYNPFEKQQGEISRIEKEYQVLQDQLKEAYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELGWFL

Parental  QDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKELELHLDHTLESVNTLTNEKMKI
          QDLEREIKKWQQEKKEIQE.LKSLKKKIKKVSNA.EMYTQKNDGK.KE.ELHLD..LE..NTLTNEKMKI
Retrocopy QDLEREIKKWQQEKKEIQETLKSLKKKIKKVSNANEMYTQKNDGKDKEHELHLDQSLEISNTLTNEKMKI

Parental  EECIKKGKDDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAYLKKLELISCDTAAYPDMESDICS
          EECIKKGK.DYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAYLKKLELIS.D.AAYPDMESDICS
Retrocopy EECIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAYLKKLELISHDPAAYPDMESDICS

Parental  WELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPKLFPESSGHDDQGLVTS
          WELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACN.VHP.L.PESSGHDDQGL.TS
Retrocopy WELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNKVHPELLPESSGHDDQGLKTS

Parental  ASDVTGNHAALHRNPSVFSAGDSPGEAPSVLLPGPPPGQPEGTQLPGPKQAGQAALSERTPVADRKQPVP
          ASDVTGNHAALHR.PSVFSAGDSPGEAPSVLLPGPPP.QPE.TQLPGPK.AGQAALSE..PVAD.KQPVP
Retrocopy ASDVTGNHAALHRDPSVFSAGDSPGEAPSVLLPGPPPSQPEATQLPGPKGAGQAALSEQSPVADQKQPVP

Parental  PGRAARSSQSPKKPFNSIIEHLSVVFPCYNSTELAGFIKKVRSKNKNSVSGLSIDEIVQRVTEHILDEQK
          PG.AA.SSQSPKKPFNSIIEHLSVVFPCYNSTELAGFIKKVRSKNKNS.SGLSIDEIVQRVTEHILDEQK
Retrocopy PGCAACSSQSPKKPFNSIIEHLSVVFPCYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQK

Parental  KKKPNPGKDKRTYEPSSAAPVTRSSQGPSSAVVAPSPKTKRQKA-DVPVRAALGASSCEICHEVFKSKNV
          KKKPNPGKDKRTYEPSSAAPVTRSSQGP..AVVAPSPKTK.QKA.DVPVR.A.G.SSCEICHEVFKSKN.
Retrocopy KKKPNPGKDKRTYEPSSAAPVTRSSQGPPLAVVAPSPKTKGQKAEDVPVRVAPGTSSCEICHEVFKSKNM

Parental  RVLKCGHKYHKGCFKQWLKGQSTCPACQGRDLLSEE
          RVLKCGHKYHKGCFKQWLKGQSTCPACQ..DLLSEE
Retrocopy RVLKCGHKYHKGCFKQWLKGQSTCPACQSHDLLSEE

Legend:

• *: Stop codon
• >: Forward frameshift by one nucleotide
• <: Reverse frameshift by one nucleotide

Expression

RNA-Seq

Nomascus leucogenys was not studied using RNA-Seq expression data.

ChIP-Seq

Nomascus leucogenys was not studied using ChIP-Seq data.

EST

Nomascus leucogenys was not studied using EST data.

TSS

Nomascus leucogenys was not studied using FANTOM5 data.

Lab

retro_nleu_12 was not experimentally validated.

Homology

Retrocopy orthology:

Nomascus leucogenys does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to help section.

---

Parental genes homology:

Parental genes homology involve 3 parental genes, and 4 retrocopies.

Species	Parental gene accession	Retrocopies number
Homo sapiens	ENSG00000182670	2 retrocopies	retro_hsap_4862, retro_hsap_886,
Gorilla gorilla	ENSGGOG00000011116	1 retrocopy	retro_ggor_3032,
Nomascus leucogenys	ENSNLEG00000004545	1 retrocopy	retro_nleu_12 ,