RetrogeneDB ID:

retro_mluc_1453

Retrocopy
location
Organism:Microbat (Myotis lucifugus)
Coordinates:GL429841:360723..361983(+)
Located in intron of:None
Retrocopy
information
Ensembl ID:None
Aliases:None
Status:NOVEL
Parental gene
information
Parental gene summary:
Parental gene symbol:None
Ensembl ID:ENSMLUG00000009040
Aliases:None
Description:None


Retrocopy-Parental alignment summary:






>retro_mluc_1453
ATGGCGACTTCTCTGGGTTCCAACACCTACAACAGGCAGAACTGGGAGGATGCGGACTTCCCCATCCTGTGCCAGACTTG
TCTTGGAGAAAACCCATATATCTGAATGACCAAAGAAAAGTATGGGAAGGAATGCAAAATCTGTGCCAGGCCATTCACAG
TGTTTCGCTGGTGCCCTGGAGTCCGCATGCGTTTCAAGAAGACTGAAGTGTGCCAAACCTGTAGTAAATTGAAGAATGTC
TGTCAGACTTGCCTCTTGGATCTGGAGTATGGCCTGCCCATCCAGGTTCGTGATGCAGGGCTGTTTTTTAAGGATGACAT
GCCCAAATCAGATGTCAACAAAGAGTACTACACACAGAATATGGAGAGGGAGATTTCTAACTCTGATGGAATACGGCCAG
TTGGCATGCTGGGGAAAGCCACATCCACCAGTGACATGCTGCTCAAACTGGCCCGGACCACACCCTACTACAAAAGGAAT
CGACCCCACATTTGCTCCTTCTGGGTGAAAGGAGAATGTAAGAGAGGAGAGGAATGTCCATACAGACATGAGAAGCCTAC
AGATCCAGATGACCCCCTTGCTGATCAGAACATTAAAGACCGATATTATGGAATCAATGACCCTGTGGCAGATAAGCTTC
TAAAGCGGGCTTCAACAATGCCTCGTTTGGACCCGCCAGAGGACAAGACTATCACCACACTATATGTTGGTGGTCTGGGC
GATACCATTACTGAGACAGACCTAAGAAATCATTTCTACCAGTTTGGAGAGATTCGGACGATCACAGTGGTGCAGAGACA
GCAATGTGCTTTCATCCAGTTTGCCACAAGGCAGGCTGCTGAAGTGGCTGCAGAGAAGTCCTTTAATAAGCTAATTGTCA
ATGGCCGTCGACTTAATGTGAAATGGGGAAGGTCCCAAGCAGCCCGAGGAAAAGAAAAAGAGAGAGACGGAACCACAGAC
TCTGGCATCAAGCTGGAGCCTGTTCCAGGCCTGCCAGGAGCTCTTCCCCCTCCTCCTGCAGCAGAGGAAGAAGCCTCTGC
CAACTACTTCAACCTGCCCCCCAGTGGCCCTCCAGCTGTGGTGAACATCGCCCTGCCGCCACCCCCTGGGATTGCCCCAC
CCCCACCCCCAGGTTTTGGGCCACATATGTTCCACCCAATGGGACCTCCTCCTCCTTTCATGAGGGCTCCAGGACCAATC
CACTATCCTTCTCAGGACCCTCAGAGAATGGGAGCTCATGCTGGGAAACACAGCAGCCCC

ORF - retro_mluc_1453 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: 95.71 %
Parental protein coverage: 100. %
Number of stop codons detected: 1
Number of frameshifts detected 0


Retrocopy - Parental Gene Alignment:

ParentalMATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEV
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYI.MTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEV
RetrocopyMATSLGSNTYNRQNWEDADFPILCQTCLGENPYI*MTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEV
ParentalCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNSDGTRPVGMLGKA
CQTCSKLKNVCQTCLLDLEYGLPIQVRDAGL.FKDDMPKSDVNKEYYTQNMEREISNSDG.RPVGMLGKA
RetrocopyCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLFFKDDMPKSDVNKEYYTQNMEREISNSDGIRPVGMLGKA
ParentalTSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVA
TSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVA
RetrocopyTSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVA