Parental gene: | TCM_042615 |
| Aliases: | None |
| Description: | Nucleotide-sugar transporter family protein |
| Organism: | Cacao (Theobroma cacao) |
| Coordinates: | 10:1436526..1439527(-) |
>TCM_042615
ATGAAGAACCAATCGAAATTTTTCACGATCGGGCTGGTAACGGCCTGGTACTCGTCCAACATTGGTGTCTTGTTGTTAAA
CAAATATTTACTAAGCAATTACGGTTTCAAATACCCAATCTTTTTAACCATGTGCCACATGACAGCTTGTTCCTTGTTAA
GCTACATCGCAATTGCATGGATGAAGATGGTTCCCATGCAGACCATTCGATCTAGGGTTCAGTTTTTCAAGATCTCGGCT
TTGAGTTTGGTCTTTTGTGTGTCGGTGGTGTTTGGAAATATCTCTTTGAGGTTCCTGCCGGTTAGTTTCAACCAGGCTAT
TGGGGCTACGACGCCGTTTTTTACAGCAGTTTTCGCTTACTTGATGACATTCAAGAGGGAGGCTTGGCTTACTTATCTTA
CCCTTGTTCCTGTTGTCACTGGGGTTATCATTGCCAGTGGGGGTGAACCAAGTTTCCATCTATTTGGATTTATCATGTGC
GTTGCAGCTACAGCTGCTAGAGCTCTCAAGTCAGTTTTACAAGGCATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTC
CATGAACCTCCTTCTCTACATGGCTCCAATAGCTGTTGTATTTCTACTTCCTGCAACACTCATTATGGAAGAAAATGTGG
TTGGTATCACCCTTGCCCTTGCCAGAGATGACATCAAGATCATTTGGTATCTACTATTCAATTCAGCACTAGCATATTTT
GTGAATTTGACCAACTTTTTGGTCACGAAACACACCAGCGCCCTGACTTTGCAGGTTCTAGGAAACGCAAAAGGAGCTGT
AGCTGTGGTGGTTTCAATTTTAATTTTTAGAAATCCAGTCTCTGTTACTGGGATGCTTGGTTATTCACTAACAGTCTTTG
GGGTTATACTCTACAGTGAAGCCAAGAAACGAAGCAAATGA
ATGAAGAACCAATCGAAATTTTTCACGATCGGGCTGGTAACGGCCTGGTACTCGTCCAACATTGGTGTCTTGTTGTTAAA
CAAATATTTACTAAGCAATTACGGTTTCAAATACCCAATCTTTTTAACCATGTGCCACATGACAGCTTGTTCCTTGTTAA
GCTACATCGCAATTGCATGGATGAAGATGGTTCCCATGCAGACCATTCGATCTAGGGTTCAGTTTTTCAAGATCTCGGCT
TTGAGTTTGGTCTTTTGTGTGTCGGTGGTGTTTGGAAATATCTCTTTGAGGTTCCTGCCGGTTAGTTTCAACCAGGCTAT
TGGGGCTACGACGCCGTTTTTTACAGCAGTTTTCGCTTACTTGATGACATTCAAGAGGGAGGCTTGGCTTACTTATCTTA
CCCTTGTTCCTGTTGTCACTGGGGTTATCATTGCCAGTGGGGGTGAACCAAGTTTCCATCTATTTGGATTTATCATGTGC
GTTGCAGCTACAGCTGCTAGAGCTCTCAAGTCAGTTTTACAAGGCATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTC
CATGAACCTCCTTCTCTACATGGCTCCAATAGCTGTTGTATTTCTACTTCCTGCAACACTCATTATGGAAGAAAATGTGG
TTGGTATCACCCTTGCCCTTGCCAGAGATGACATCAAGATCATTTGGTATCTACTATTCAATTCAGCACTAGCATATTTT
GTGAATTTGACCAACTTTTTGGTCACGAAACACACCAGCGCCCTGACTTTGCAGGTTCTAGGAAACGCAAAAGGAGCTGT
AGCTGTGGTGGTTTCAATTTTAATTTTTAGAAATCCAGTCTCTGTTACTGGGATGCTTGGTTATTCACTAACAGTCTTTG
GGGTTATACTCTACAGTGAAGCCAAGAAACGAAGCAAATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Amborella trichopoda | AMTR_s00080p00074790 | ortholog_one2many | 1 retrogene | |
| Medicago truncatula | MTR_3g070000 | ortholog_one2one | 1 retrogene | |
| Solanum tuberosum | PGSC0003DMG401027186 | ortholog_one2one | 1 retrogene | |
| Prunus persica | PRUPE_ppa009115mg | ortholog_one2one | 1 retrogene | |
| Solanum lycopersicum | Solyc05g052790.2 | ortholog_one2one | 1 retrogene | |
| Vitis vinifera | VIT_13s0019g03270 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tcac_6 | 66.44 | 96.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all TCM_042615 retrocopies