Parental gene:

POPTRDRAFT_571511, POPTR_0001s44610

Aliases:None
Description:Predicted protein [Source:UniProtKB/TrEMBL;Acc:B9I7M3]
Organism:Western balsam poplar (Populus trichocarpa)
Coordinates:1:45076710..45080198(+)


>POPTR_0001s44610
ATGATTTGCAGTGTCAAGCAATCTGTTATAACGCCAACAATCAACGGATCTGACACTATTTTTCGCCGAAAAAACCCGTC
GGCTATACAAAGATCTTTGATTTTGCCTTCACTTAATGGCAATAAGAGTTCAAAACCAGTTCTTTCAATGTCCAAGCCTT
TGCATGTGTCAAAGGTTGAGTCTTTTGCTTTGTCAAAGCCTCAAAAGAGGAGCTTGATCACATGCAATGCCTATGAGGCT
GATCGATCAGAGCCAATTGAGGCACCTGAGGTGAAATCAGAGGCTGCAAAAAAGGTTAAGATTGGGATTTACTTTGCTGT
TTGGTGGGCTTTGAATGTTGTGTTTAATATTTACAACAAGAAGGTTTTGAATGCTTTTCCATATCCATGGTTGACTTCTA
CACTCTCTCTCGCTTGTGGATCTCTGATGATGTTTATCTCATGGGCTACCCGGATTGCTGAGACACCAAAGACTGATTTT
GAGTTTTGGAAGACTTTATTCCCTGTTGCTGTGGCACATACAATTGGGCATGTAGCAGCAACTGTGAGTATGTCGAAGGT
TGCAGTTTCCTTTACCCATATCATTAAGAGTGGTGAGCCTGCTTTCAGCGTATTGGTATCAAGGTTCATATTGGGTGAGA
CTTTCCCTTCATCAGTTTACCTGTCCCTTGTTCCGATCATTGGTGGTTGTGCATTAGCTGCTGTTACTGAGCTCAACTTC
AACATGATTGGTTTTATGGGGGCCATGATTTCCAACTTGGCTTTTGTTTTCCGCAACATATTTTCAAAGAAGGGCATGAA
GGGGAAGTCTGTTAGTGGGATGAACTACTATGCTTGTCTCTCTATGTTGTCACTCTTGATTCTCACACCTTTTGCTATCG
CTGTGGAGGGACCACAGATGTGGGCTGCAGGTTGGCAGACAGCCCTCTCTGAAATTGGACCGAATTTTGTATGGTGGATT
GCAGCACAAAGTGTATTCTATCATCTTTACAATCAAGTGTCATACATGTCCCTAGATGAGATCTCTCCCTTGACCTTTAG
CATTGGAAATACCATGAAGCGTATATCTGTCATAGTCTCATCCATTATCATTTTCCACACACCCGTCCAGCCTGTCAATG
CTCTTGGAGCGGCCATCGCTGTCCTTGGAACCTTCTTGTATTCCCAGGTAATTTTCCCGCTTCTCTTGATGAATTTAGTA
TGA

Species Parental gene accession Homology type Retrogenes number
Amborella trichopoda AMTR_s00062p00036220 ortholog_one2many 1 retrogene
retro_atri_14,
Brassica oleracea Bo9g118840 ortholog_many2many 1 retrogene
retro_bole_30,
Musa acuminata GSMUA_Achr7G03380_001 ortholog_many2many 1 retrogene
retro_macu_2,
Physcomitrella patens PP1S70_177V6 ortholog_many2many 1 retrogene
retro_ppat_10,
Arabidopsis lyrata scaffold_802017.1 ortholog_one2many 1 retrogene
retro_alyr_24,
Theobroma cacao TCM_030978 ortholog_one2many 1 retrogene
retro_tcac_18,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptri_19 51.10 78.50
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Download FASTA sequences of all POPTR_0001s44610 retrocopies