Parental gene: | PGSC0003DMG400029083 |
| Aliases: | None |
| Description: | Potassium channel NKT1 [Source:PGSC_GENE;Acc:PGSC0003DMG400029083] |
| Organism: | Potato (Solanum tuberosum) |
| Coordinates: | 8:39973098..39979045(-) |
>PGSC0003DMG400029083
ATGGATAGAGCGTATTCCATGGATGATAAAAGCTCTCATTATAGTATTACTAGTGCCATTCTTCCTTCTCTTGGTGCCCA
TACTAATTGCAAAACCAAACTCCGTCGCTACATCATCTCCCCTTCTAATCCCCGTTACAGGGCTTGGAATGCTTATTTGG
TGCTACTTGTATTCTACACAGCATGGGCGTCACCTTTTCAGTTTGGATTTCTAGACAGACCTCGAGGAGTTATTCCCATC
TTAGATAACATAGCTAATTCATTTTTTGCCATTGACATTGTCCTCACATTCTTTGTTGCCTATCTTGATAAATCAGCTTG
CAGTATGATTGATGACCCAAAGCGGATAGCTTTGAGGTACACAAAATCCGGGTTTTTGTTTGATGTTATATCCACCATCC
CTTCTGAACTTATTCGTAAATCAACTCCCTATTTTCTTCAATCATATGAATACTTCAGTATCCTTCGTCTCTGGCGTCTC
AGAAGAGTCAGTGCCATGTTTGCAAGATTGGAGAAAAACAGGAAGATCAGTTACTTTGGGGTTCGCGTACTGAAGCTTAT
ATGTGTTACTCTTTTTGCTGTTCATTGTGCTGGCTGCTTCTACTACTTTCTTGCTGCTCGGAAACAAGACACAAGTAAAA
CATGGCTTTCACTTGCCATTGGAAATCATCATGACAGGAGCATCTGGGATCTCTATGTAATGTGTATGTATTGGTCCATT
ACAACGCTTACAACAACTGGCTATGGGGATTTGCACGCTGTGGCTACAGAGGAAATGATATTCACTATGTTTTACATGTT
ATTCGACCTCGGGTTGACTGCATATCTTATTGGAAACATGACCAACTTGGTTGTCCATGGAACCAGTAAGACTAGGAAAT
TCAGGGATACTATTCAAGCTGCCTCAAGCTTTGCACAAAGGAATAAGCTGCCGGTTCGCCTTGAAGAACAGATGATAGCT
CACTTGCGTTTGAGGCACAGAACAGATTCAGAAGGTCTTCAGCAGCAAGAAACTCTTGAAACACTACCCAAAGCTATTCG
ATCTGGCATTTCACATTATCTATTCTATCCACTGGTGGATAAGGTGTACTTATTCCATGGGGTATCAAATGACCTACTTT
TTCAACTGGTTTCTGAGATGAAGGCCGAGTATTTCCCTCCAAAAGAGGATGTTATTTTGCAAAATGAAGCACCTACAGAT
TTGTACATTCTGGTAACTGGAGCAGTGGATCTTATATCACACAAGAATGGAATGGATCAGGTAGTTGGCGAGTTGAAGAT
GGGGGATGTTTGTGGAGAAGTTGGTGTCCTTTGCTGTAGGCCTCAACTTTTTAATGTTCGAACCAAAAAAGTATCCCAAC
TGCTACGCTTGGATCGCAGTTCATTCTTCAACATCGTTAAAACAAATATAGGAGACGGGACAATAATCATGAACAATCTC
CTTCAGCATTTGAAAGAGCGAAGGGACCCGATGATGACAGCAATATTAGCAGATATAGAACATATGCTGACTCAGGGAAG
AATGGACATGCCTCTTAGCTTATGTTTTGCAGCAAACAGAGGAGATGATCTTTTGTTGCGCCAATTGCTAAAAAAGGGCA
TGGATCCTAATGAATCTGATAGCAATGGGCGTACAGTGTTGCATATAGCAGCTTCAAAAGGAAGTGTTGAATGTATTCTT
CTACTTCTCGACTTTGGAGCACATCCAAATAGAAAAGATTCTGAAGGAAATGTTCCATTGTGGGATGCAATTGTGGGGAA
GCATGAAGCTGTGGTAAAATTGCTTGTGGACAATGGTGCAACAATATCTTCAGGAGACGTAGGTCAGTTTGCTTGCTTTG
CAGTGGAGCAAGGCAGCTTAGACTTGCTTAAGGAGATCATCAAGTATGGAGGTGATGTCACCCTTCTTAACAGCCTAGGC
ACGACAGCAATACACACTGCTATATCTGAGGAGAATGTGGAAATAGTTAAATTCCTGTTGGAACAAGGAACTGACATTGA
TAAAGCAGACGTTCACGGTTGGACACCAAGAGCATTGGCTGAATATCAGGGCCACGGAGAGATAAAGGAGCTTTTCAACT
TGATGCAACCAACTAGTAAAGAAACCAATGTCTGTCCTCCTGAAGCGCCTTTTGCTCCCTACCTTATGAAGTATCAAAGC
GATCCCGCGATTCCTCTCTTCATTCATGAAGAAACAGCTAGAGAAACTGGCTCCTCCAACGGCAGATTGAGGAGAAGGGC
TAGTTTCTTTCAGAATTCACTGATAGGATTTGTGGCTGCACGCCAGAGACACCATGAAGGAACTTACTGTGGAAACTTGG
CAGGAGGAGGTGGCCCGGAGTATTCTTCAACTAAAATTGCCAATTCAAGAATTCCAAGCAGAATAACCATCCGTTGTCTA
GAGAAAGCTCATATAGGTAGAAGGGCTGTACTTTTGCCAGATTCCATTAATGAGCTGCTTGATATCGGTGCTGAGAAATT
TGGCGTCTCTCTCGCGAAAGTACTTACGGAAGATGGAGCACTAATTGAGGACATTGAAGTGATAAGAGATGGAGATCATC
TAGTTCTTGCTACTTCAGAAAATTAA
ATGGATAGAGCGTATTCCATGGATGATAAAAGCTCTCATTATAGTATTACTAGTGCCATTCTTCCTTCTCTTGGTGCCCA
TACTAATTGCAAAACCAAACTCCGTCGCTACATCATCTCCCCTTCTAATCCCCGTTACAGGGCTTGGAATGCTTATTTGG
TGCTACTTGTATTCTACACAGCATGGGCGTCACCTTTTCAGTTTGGATTTCTAGACAGACCTCGAGGAGTTATTCCCATC
TTAGATAACATAGCTAATTCATTTTTTGCCATTGACATTGTCCTCACATTCTTTGTTGCCTATCTTGATAAATCAGCTTG
CAGTATGATTGATGACCCAAAGCGGATAGCTTTGAGGTACACAAAATCCGGGTTTTTGTTTGATGTTATATCCACCATCC
CTTCTGAACTTATTCGTAAATCAACTCCCTATTTTCTTCAATCATATGAATACTTCAGTATCCTTCGTCTCTGGCGTCTC
AGAAGAGTCAGTGCCATGTTTGCAAGATTGGAGAAAAACAGGAAGATCAGTTACTTTGGGGTTCGCGTACTGAAGCTTAT
ATGTGTTACTCTTTTTGCTGTTCATTGTGCTGGCTGCTTCTACTACTTTCTTGCTGCTCGGAAACAAGACACAAGTAAAA
CATGGCTTTCACTTGCCATTGGAAATCATCATGACAGGAGCATCTGGGATCTCTATGTAATGTGTATGTATTGGTCCATT
ACAACGCTTACAACAACTGGCTATGGGGATTTGCACGCTGTGGCTACAGAGGAAATGATATTCACTATGTTTTACATGTT
ATTCGACCTCGGGTTGACTGCATATCTTATTGGAAACATGACCAACTTGGTTGTCCATGGAACCAGTAAGACTAGGAAAT
TCAGGGATACTATTCAAGCTGCCTCAAGCTTTGCACAAAGGAATAAGCTGCCGGTTCGCCTTGAAGAACAGATGATAGCT
CACTTGCGTTTGAGGCACAGAACAGATTCAGAAGGTCTTCAGCAGCAAGAAACTCTTGAAACACTACCCAAAGCTATTCG
ATCTGGCATTTCACATTATCTATTCTATCCACTGGTGGATAAGGTGTACTTATTCCATGGGGTATCAAATGACCTACTTT
TTCAACTGGTTTCTGAGATGAAGGCCGAGTATTTCCCTCCAAAAGAGGATGTTATTTTGCAAAATGAAGCACCTACAGAT
TTGTACATTCTGGTAACTGGAGCAGTGGATCTTATATCACACAAGAATGGAATGGATCAGGTAGTTGGCGAGTTGAAGAT
GGGGGATGTTTGTGGAGAAGTTGGTGTCCTTTGCTGTAGGCCTCAACTTTTTAATGTTCGAACCAAAAAAGTATCCCAAC
TGCTACGCTTGGATCGCAGTTCATTCTTCAACATCGTTAAAACAAATATAGGAGACGGGACAATAATCATGAACAATCTC
CTTCAGCATTTGAAAGAGCGAAGGGACCCGATGATGACAGCAATATTAGCAGATATAGAACATATGCTGACTCAGGGAAG
AATGGACATGCCTCTTAGCTTATGTTTTGCAGCAAACAGAGGAGATGATCTTTTGTTGCGCCAATTGCTAAAAAAGGGCA
TGGATCCTAATGAATCTGATAGCAATGGGCGTACAGTGTTGCATATAGCAGCTTCAAAAGGAAGTGTTGAATGTATTCTT
CTACTTCTCGACTTTGGAGCACATCCAAATAGAAAAGATTCTGAAGGAAATGTTCCATTGTGGGATGCAATTGTGGGGAA
GCATGAAGCTGTGGTAAAATTGCTTGTGGACAATGGTGCAACAATATCTTCAGGAGACGTAGGTCAGTTTGCTTGCTTTG
CAGTGGAGCAAGGCAGCTTAGACTTGCTTAAGGAGATCATCAAGTATGGAGGTGATGTCACCCTTCTTAACAGCCTAGGC
ACGACAGCAATACACACTGCTATATCTGAGGAGAATGTGGAAATAGTTAAATTCCTGTTGGAACAAGGAACTGACATTGA
TAAAGCAGACGTTCACGGTTGGACACCAAGAGCATTGGCTGAATATCAGGGCCACGGAGAGATAAAGGAGCTTTTCAACT
TGATGCAACCAACTAGTAAAGAAACCAATGTCTGTCCTCCTGAAGCGCCTTTTGCTCCCTACCTTATGAAGTATCAAAGC
GATCCCGCGATTCCTCTCTTCATTCATGAAGAAACAGCTAGAGAAACTGGCTCCTCCAACGGCAGATTGAGGAGAAGGGC
TAGTTTCTTTCAGAATTCACTGATAGGATTTGTGGCTGCACGCCAGAGACACCATGAAGGAACTTACTGTGGAAACTTGG
CAGGAGGAGGTGGCCCGGAGTATTCTTCAACTAAAATTGCCAATTCAAGAATTCCAAGCAGAATAACCATCCGTTGTCTA
GAGAAAGCTCATATAGGTAGAAGGGCTGTACTTTTGCCAGATTCCATTAATGAGCTGCTTGATATCGGTGCTGAGAAATT
TGGCGTCTCTCTCGCGAAAGTACTTACGGAAGATGGAGCACTAATTGAGGACATTGAAGTGATAAGAGATGGAGATCATC
TAGTTCTTGCTACTTCAGAAAATTAA
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_stub_19 | 79.92 | 58.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all PGSC0003DMG400029083 retrocopies