Parental gene: | PGSC0003DMG400014472 |
| Aliases: | None |
| Description: | Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400014472] |
| Organism: | Potato (Solanum tuberosum) |
| Coordinates: | 12:49058582..49067549(+) |
>PGSC0003DMG400014472
ATGAGGAATTGGAGCTGGGGTTTTCTTGTGCTTCTTCATCTTGCGTTCTTGCTGGGAACTGAAGCCTTCAAATTTCATAA
GACTCAACGTACTGAGAGAATCTCAGGTAGTGCTGGTGATGTCTTGGAAGATGATCCTGTTGGGAGGTTAAAAGTTTTTG
TATATGAGCTTCCCAGCAAATACAACAAGAAAATTCTTCAGAAAGACCCACGATGTCTCAGTCACATGTTTGCTGCAGAG
ATCTATATGCATCGTTTCCTCTTATCTAGCCCTGTACGAACCCTTAATCCTGAGGAAGCTGATTGGTTCTACACCCCTGT
TTACACCACTTGTGACCTGACACCAAATGGCCTTCCTTTACCCTTCAAGTCACCACGAATGATGAGGAGTGCAATACAAC
TTATTGCTTCTAACTGGCCTTATTGGAATAGGACAGAGGGCGCTGATCACTTCTTCATTGTCCCACATGATTTTGCTGCT
TGTTTTCATTATCAAGAGGAAAAAGCTATTGGGAGGGGAATTCTTCCATTGCTCCAGCGTTCAACTTTAGTTCAAACTTT
TGGACAAAGAAATCACGTGTGTTTGAAGGATGGTTCAATTACAATTCCTCCCTATGCTCCTCCACAGAAAATGCAATCCC
ACTTCATCCCTCCAGATATTCCGCGATCCATCTTTGTTTACTTCCGTGGCTTGTTCTATGATGTAGGAAATGATCCAGAA
GGTGGTTATTATGCGAGAGGTGCCCGGGCAGCAGTGTGGGAGAACTTTAAGGACAATCCTCTTTTTGATATTTCTACGGA
GCATCCAACTACCTACTACGAGGACATGCAGCGAGCCATCTTTTGCTTGTGCCCACTTGGGTGGGCACCATGGAGCCCAA
GATTGGTTGAAGCAGTTATATTTGGATGCATCCCTGTTATCATTGCAGATGATATTGTCTTGCCATTTGCTGATGCAATC
CCCTGGGAAGAGATTGGTGTTTTTGTAGCCGAGAAGGACGTTCCAAATTTAGATACTATTCTCACTTCTATTCCACCAGA
AGAAATATTGAGGAAGCAGAGATTGCTTGCCAACCCTTCAATGAAGCAGGCAATGTTGTTTCCACAACCTGCTCAATCAG
GTGATGCTTTCCATCAAATTTTGAATGGACTTGCTCGTAAACTGCCACATGACAGGAGCGTTTACTTGACGCCTGGGGAG
AAGATCTTAAACTGGACTGCTGGTCCAGTTGGTGACCTAAAACCTTGGTAG
ATGAGGAATTGGAGCTGGGGTTTTCTTGTGCTTCTTCATCTTGCGTTCTTGCTGGGAACTGAAGCCTTCAAATTTCATAA
GACTCAACGTACTGAGAGAATCTCAGGTAGTGCTGGTGATGTCTTGGAAGATGATCCTGTTGGGAGGTTAAAAGTTTTTG
TATATGAGCTTCCCAGCAAATACAACAAGAAAATTCTTCAGAAAGACCCACGATGTCTCAGTCACATGTTTGCTGCAGAG
ATCTATATGCATCGTTTCCTCTTATCTAGCCCTGTACGAACCCTTAATCCTGAGGAAGCTGATTGGTTCTACACCCCTGT
TTACACCACTTGTGACCTGACACCAAATGGCCTTCCTTTACCCTTCAAGTCACCACGAATGATGAGGAGTGCAATACAAC
TTATTGCTTCTAACTGGCCTTATTGGAATAGGACAGAGGGCGCTGATCACTTCTTCATTGTCCCACATGATTTTGCTGCT
TGTTTTCATTATCAAGAGGAAAAAGCTATTGGGAGGGGAATTCTTCCATTGCTCCAGCGTTCAACTTTAGTTCAAACTTT
TGGACAAAGAAATCACGTGTGTTTGAAGGATGGTTCAATTACAATTCCTCCCTATGCTCCTCCACAGAAAATGCAATCCC
ACTTCATCCCTCCAGATATTCCGCGATCCATCTTTGTTTACTTCCGTGGCTTGTTCTATGATGTAGGAAATGATCCAGAA
GGTGGTTATTATGCGAGAGGTGCCCGGGCAGCAGTGTGGGAGAACTTTAAGGACAATCCTCTTTTTGATATTTCTACGGA
GCATCCAACTACCTACTACGAGGACATGCAGCGAGCCATCTTTTGCTTGTGCCCACTTGGGTGGGCACCATGGAGCCCAA
GATTGGTTGAAGCAGTTATATTTGGATGCATCCCTGTTATCATTGCAGATGATATTGTCTTGCCATTTGCTGATGCAATC
CCCTGGGAAGAGATTGGTGTTTTTGTAGCCGAGAAGGACGTTCCAAATTTAGATACTATTCTCACTTCTATTCCACCAGA
AGAAATATTGAGGAAGCAGAGATTGCTTGCCAACCCTTCAATGAAGCAGGCAATGTTGTTTCCACAACCTGCTCAATCAG
GTGATGCTTTCCATCAAATTTTGAATGGACTTGCTCGTAAACTGCCACATGACAGGAGCGTTTACTTGACGCCTGGGGAG
AAGATCTTAAACTGGACTGCTGGTCCAGTTGGTGACCTAAAACCTTGGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza longistaminata | KN538848.1_FG012 | ortholog_many2many | 1 retrogene | |
| Oryza brachyantha | OB01G51480 | ortholog_many2many | 1 retrogene | |
| Solanum lycopersicum | Solyc12g042360.1 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_stub_120 | 84.21 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all PGSC0003DMG400014472 retrocopies