Parental gene: | OS07G0106200 |
| Aliases: | None |
| Description: | Os07g0106200 protein; Putative monosaccharide transport protein MST1; cDNA clone:J033117G08, full insert sequence [Source:UniProtKB/TrEMBL;Acc:Q7EZD7] |
| Organism: | Rice subsp. japonica (Oryza sativa japonica) |
| Coordinates: | 7:349200..353686(-) |
>OS07G0106200
ATGGCCGGCGGCGCGGTGGTGAGCACGGGGGCAGGCAAGGACTACCCTGGCAAGCTCACCCTCTTCGTCTTCTTCACATG
CGTCGTCGCCGCCACCGGTGGTCTCATCTTCGGATATGACATCGGTATATCAGGTGGTGTGACGTCCATGGACCCGTTCC
TGAGGAAGTTCTTCCCGGAGGTGTATCGGAAGAAGCAGATGGCGGACAAGAACAACCAGTACTGCAAGTACGACAACCAG
CTGCTGCAGACCTTCACCTCGTCGCTCTACCTCGCCGCCCTCGTCTCCTCCTTCTTCGCCGCCACCGTCACCCGCGTCCT
CGGCCGCAAGTGGTCCATGTTCGCCGGCGGCCTCACCTTCCTCATCGGCGCCGCCCTCAACGGCGCCGCCGAGAACGTCG
CCATGCTCATCGTCGGTCGTATCCTCCTCGGTGTCGGCGTCGGCTTCGCCAATCAGTCGGTGCCGGTGTACTTGTCGGAG
ATGGCGCCGGCTCGGCTGCGGGGGATGCTGAACATCGGGTTCCAGCTGATGATCACCATCGGCATCCTGGCGGCGGAGCT
GATAAACTACGGGACGGCGAAGATCAAGGCCGGGTGGGGATGGCGGGTGAGCCTGGCGCTGGCCGCCGTCCCCGCCGCCA
TCATCACCCTCGGCTCCCTCTTCCTCCCGGACACCCCCAACTCGCTCATCGACAGGGGCCACCCGGAGGCGGCGGAGCGC
ATGCTCCGGCGCATCCGCGGCTCCGACGTGGACGTGTCGGAGGAGTACGCGGACCTGGTGGCGGCGAGCGAGGAGTCGAA
GCTGGTGCAGCACCCGTGGCGCAACATCCTCCGCCGCAAGTACCGCGCCCAGCTCACCATGGCCATCTGCATCCCCTTCT
TCCAGCAGCTCACCGGGATCAACGTCATCATGTTCTACGCCCCCGTGCTGTTCGACACCCTGGGCTTCAAGAGCGACGCG
TCGCTCATGTCCGCCGTCATCACGGGCCTCGTCAACGTCTTCGCCACGCTGGTGTCCATCTTCACCGTGGACCGCCTCGG
CCGCCGCAAGCTGTTCCTGCAGGGCGGGGCGCAGATGGTGGTGTGCCAGGTGGTGGTGGGGACGCTGATCGCCGTCAAGT
TCGGGACGAGCGGCATCGGCGACATCCCCAAGGGGTACGCGGCGGTGGTGGTGCTCTTCATCTGCATGTACGTGGCAGGG
TTCGCGTGGTCGTGGGGCCCACTGGGGTGGCTCGTCCCCAGCGAGATCTTCCCGCTGGAGATCCGGCCGGCGGGGCAGAG
CATCAACGTGTCGGTGAACATGCTCTTCACCTTCGTCATCGCGCAGGCCTTCCTCACCATGCTCTGCCACATGAAGTTCG
GCCTCTTCTACTTCTTCGCCGGATGGGTCGTCATCATGACCGTCTTCATCGCCCTCTTCCTCCCCGAGACCAAGAACGTC
CCCATCGAGGAGATGGTGCTCGTCTGGAAGTCCCACTGGTTCTGGCGCCGATTCATCGGAGACCACGACGTCCACGTCGG
CGCCAACCACGTCTCCAACAATAAGCTCCAACCATAA
ATGGCCGGCGGCGCGGTGGTGAGCACGGGGGCAGGCAAGGACTACCCTGGCAAGCTCACCCTCTTCGTCTTCTTCACATG
CGTCGTCGCCGCCACCGGTGGTCTCATCTTCGGATATGACATCGGTATATCAGGTGGTGTGACGTCCATGGACCCGTTCC
TGAGGAAGTTCTTCCCGGAGGTGTATCGGAAGAAGCAGATGGCGGACAAGAACAACCAGTACTGCAAGTACGACAACCAG
CTGCTGCAGACCTTCACCTCGTCGCTCTACCTCGCCGCCCTCGTCTCCTCCTTCTTCGCCGCCACCGTCACCCGCGTCCT
CGGCCGCAAGTGGTCCATGTTCGCCGGCGGCCTCACCTTCCTCATCGGCGCCGCCCTCAACGGCGCCGCCGAGAACGTCG
CCATGCTCATCGTCGGTCGTATCCTCCTCGGTGTCGGCGTCGGCTTCGCCAATCAGTCGGTGCCGGTGTACTTGTCGGAG
ATGGCGCCGGCTCGGCTGCGGGGGATGCTGAACATCGGGTTCCAGCTGATGATCACCATCGGCATCCTGGCGGCGGAGCT
GATAAACTACGGGACGGCGAAGATCAAGGCCGGGTGGGGATGGCGGGTGAGCCTGGCGCTGGCCGCCGTCCCCGCCGCCA
TCATCACCCTCGGCTCCCTCTTCCTCCCGGACACCCCCAACTCGCTCATCGACAGGGGCCACCCGGAGGCGGCGGAGCGC
ATGCTCCGGCGCATCCGCGGCTCCGACGTGGACGTGTCGGAGGAGTACGCGGACCTGGTGGCGGCGAGCGAGGAGTCGAA
GCTGGTGCAGCACCCGTGGCGCAACATCCTCCGCCGCAAGTACCGCGCCCAGCTCACCATGGCCATCTGCATCCCCTTCT
TCCAGCAGCTCACCGGGATCAACGTCATCATGTTCTACGCCCCCGTGCTGTTCGACACCCTGGGCTTCAAGAGCGACGCG
TCGCTCATGTCCGCCGTCATCACGGGCCTCGTCAACGTCTTCGCCACGCTGGTGTCCATCTTCACCGTGGACCGCCTCGG
CCGCCGCAAGCTGTTCCTGCAGGGCGGGGCGCAGATGGTGGTGTGCCAGGTGGTGGTGGGGACGCTGATCGCCGTCAAGT
TCGGGACGAGCGGCATCGGCGACATCCCCAAGGGGTACGCGGCGGTGGTGGTGCTCTTCATCTGCATGTACGTGGCAGGG
TTCGCGTGGTCGTGGGGCCCACTGGGGTGGCTCGTCCCCAGCGAGATCTTCCCGCTGGAGATCCGGCCGGCGGGGCAGAG
CATCAACGTGTCGGTGAACATGCTCTTCACCTTCGTCATCGCGCAGGCCTTCCTCACCATGCTCTGCCACATGAAGTTCG
GCCTCTTCTACTTCTTCGCCGGATGGGTCGTCATCATGACCGTCTTCATCGCCCTCTTCCTCCCCGAGACCAAGAACGTC
CCCATCGAGGAGATGGTGCTCGTCTGGAAGTCCCACTGGTTCTGGCGCCGATTCATCGGAGACCACGACGTCCACGTCGG
CGCCAACCACGTCTCCAACAATAAGCTCCAACCATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA024972 | ortholog_one2one | 1 retrogene | |
| Medicago truncatula | MTR_0009s0370 | ortholog_many2many | 1 retrogene | |
| Oryza barthii | OBART07G00410 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM07G00430 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI07G00430 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS07G0559700 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_osat_43 | 73.41 | 97.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OS07G0106200 retrocopies