Parental gene: | ORUFI03G13820 |
| Aliases: | None |
| Description: | None |
| Organism: | Brownbeard rice (Oryza rufipogon) |
| Coordinates: | 3:9538793..9543916(+) |
>ORUFI03G13820
ATGGATTCCACGGCCTGCCTCCGCCTCCCGTTCCTCCCCGCCCGGACCCGCCCCTCCTCCTCCTCGTCGTCGTCTCCCCG
ACGCGCCGCTCGCGCGTCCTCCATCAAATGCTGCGCCGCCGCCTCCGACGCCGGTGCCAGTTCGGCCTCCATCTCTTCCG
CGTCGCCGCGGCGGCCGGACGTGGTGAACGGCGTGGGGCCCGCCGGCGTAGACGGCCTCGCGGGTCCGCCCGTGCCCGTA
CCGGACTCCCCCGCCCCCGCCTCCCGTGATCTCCACTGGCTGCCTCGCCCTCTCACCAGCGCCGACCTGATGGGCGTCAG
CGGGGAGGGGCTCAAGGTTGCCTACCAGGGTTGCCCTGGAGCGTACAGCGAGGCGGCAGCGAAGAAGGCGTACCCAAATT
GCCAGACTGTGCCCTGTGAGCACTTCGATACTGCATTCAAGGCTGTTGAAAACTGGTTAGCTGACAGGGCAGTATTGCCA
CTTGAGAATTCATTGGGTGGTAGCATACATAGGAACTTTGACCTTTTACTTCGTCATAGATTGCACATTGTTGGAGAGGT
CCGTCTTGCTGTTCGTCATTGCCTGTTAGCCAATCCCGGTGTCAAGATTGAAAACTTGAAAAGTGCAATGAGCCATCCCC
AGGCTCTTGCACAATGTGAGCACACATTGACAGAGTTCGGAATTGAACATAGAGAAGCTGTTGATGATACTGCTGGTGCA
GCAAAGACTGTAGCAGAACAAAATCTCCAAGATACCGGTGCGATTGCCAGTTCACTGGCAGCTGAACTTTATGGACTGAA
TGTTCTTGCTGAAAATATTCAGGATGACAAAGATAATGTTACCCGTTTTATGATGCTGGCTCGAGAACCAATTATACCTC
GCACCGATAAACCATTCAAGACTAGCATAGTCTTTTCACTTGAAGAAGGACCTGGGCAACTCTTTAAGGCACTTGGGGTG
TTTGCACTGAGGGAAATCAACCTAACCAAGATAGAAAGCCGCCCACACAAGAAAAGGCCTCTTCGTATAACTGACGACAG
CTTTTCCACACCGTCAAAGCAGTTTGACTACCTCTTCTATATGGACCTTGAGGCATCAATGGCTGATCCAAAAACTCAGA
ATGCTCTTGGAAATTTGAAGGAGTTTGCAACCTTTTTAAGAGTCCTTGGAAGCTATCCTACAGATGATTACCAGGGATGG
ATTGAGCGTGGGCTGTCAATTTCACAGCGAGTTGGGAAGTCATCAATAATTTCTAGACTGATGCTAATTTGA
ATGGATTCCACGGCCTGCCTCCGCCTCCCGTTCCTCCCCGCCCGGACCCGCCCCTCCTCCTCCTCGTCGTCGTCTCCCCG
ACGCGCCGCTCGCGCGTCCTCCATCAAATGCTGCGCCGCCGCCTCCGACGCCGGTGCCAGTTCGGCCTCCATCTCTTCCG
CGTCGCCGCGGCGGCCGGACGTGGTGAACGGCGTGGGGCCCGCCGGCGTAGACGGCCTCGCGGGTCCGCCCGTGCCCGTA
CCGGACTCCCCCGCCCCCGCCTCCCGTGATCTCCACTGGCTGCCTCGCCCTCTCACCAGCGCCGACCTGATGGGCGTCAG
CGGGGAGGGGCTCAAGGTTGCCTACCAGGGTTGCCCTGGAGCGTACAGCGAGGCGGCAGCGAAGAAGGCGTACCCAAATT
GCCAGACTGTGCCCTGTGAGCACTTCGATACTGCATTCAAGGCTGTTGAAAACTGGTTAGCTGACAGGGCAGTATTGCCA
CTTGAGAATTCATTGGGTGGTAGCATACATAGGAACTTTGACCTTTTACTTCGTCATAGATTGCACATTGTTGGAGAGGT
CCGTCTTGCTGTTCGTCATTGCCTGTTAGCCAATCCCGGTGTCAAGATTGAAAACTTGAAAAGTGCAATGAGCCATCCCC
AGGCTCTTGCACAATGTGAGCACACATTGACAGAGTTCGGAATTGAACATAGAGAAGCTGTTGATGATACTGCTGGTGCA
GCAAAGACTGTAGCAGAACAAAATCTCCAAGATACCGGTGCGATTGCCAGTTCACTGGCAGCTGAACTTTATGGACTGAA
TGTTCTTGCTGAAAATATTCAGGATGACAAAGATAATGTTACCCGTTTTATGATGCTGGCTCGAGAACCAATTATACCTC
GCACCGATAAACCATTCAAGACTAGCATAGTCTTTTCACTTGAAGAAGGACCTGGGCAACTCTTTAAGGCACTTGGGGTG
TTTGCACTGAGGGAAATCAACCTAACCAAGATAGAAAGCCGCCCACACAAGAAAAGGCCTCTTCGTATAACTGACGACAG
CTTTTCCACACCGTCAAAGCAGTTTGACTACCTCTTCTATATGGACCTTGAGGCATCAATGGCTGATCCAAAAACTCAGA
ATGCTCTTGGAAATTTGAAGGAGTTTGCAACCTTTTTAAGAGTCCTTGGAAGCTATCCTACAGATGATTACCAGGGATGG
ATTGAGCGTGGGCTGTCAATTTCACAGCGAGTTGGGAAGTCATCAATAATTTCTAGACTGATGCTAATTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Amborella trichopoda | AMTR_s00080p00093010 | ortholog_one2many | 1 retrogene | |
| Oryza nivara | ONIVA03G14420 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA03G0127300 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oruf_22 | 65.36 | 71.39 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ORUFI03G13820 retrocopies