Parental gene: | ORUFI02G34000 |
| Aliases: | None |
| Description: | None |
| Organism: | Brownbeard rice (Oryza rufipogon) |
| Coordinates: | 2:29303799..29306713(+) |
>ORUFI02G34000
ATGACCTCGCTGTCGTCCTCCGCCGCCGCGGCGCGCGCCACCTTCGTCATGCCGTCGTCGGTGCGTGGGGGCATGAGCCG
CGGCAGGAGGATGGCGAGGCTGGTGACGCGCGCGGCGGCGTCGAGCCCGAAGCTCCCGAGCGGGCGGCGGCTGCGGGTGG
CGGTGGTCGGAGGCGGACCCGCGGGCGGCGCGGCGGCGGAGGCGCTGGCCAAGGGCGGCGTGGAGACGGTGCTCATCGAA
CGGAAGCTGGACAACTGCAAGCCCTGCGGCGGGGCCATCCCGCTGTGCATGGTGTCGGAGTTCGACCTGCCGCTGGACCT
CGTCGACAGGAAGGTGAGGAAGATGAAGATGATTTCGCCGTCCAACGTCGCCGTCGACATCGGCGGCACGCTCGCGCCGC
ACGAGTACATCGGCATGGTCCGCCGCGAGGTGCTCGACGCCTACCTCCGCTCCCGCGCCGAGGGGGCCGGCGCCGAGGTC
GTCAATGGTCTCTTCCTGAGGTATGAGGCGCCCAAGGAACCCAACGGGTCGTACGTGGTGCACTACAACCACTACGACAG
CTCCAACGGCAAGGCCGGCGGCGAGAAGCGGACGTTCGAGGTGGACGCGATCGTGGGCGCGGACGGCGCCAACTCCCGCG
TCGCCAAGGACATGGGCGCCGGCGACTACGAGTACGCCATCGCGTTCCAGGAGCGCGTCAAGATCCCCGACGACAAGATG
AAGTACTACGAGGAGCGCGCCGAGATGTACGTCGGCGACGACGTCTCGCCGGACTTCTACGGCTGGGTGTTCCCCAAGTG
CGACCACGTCGCCGTCGGCACCGGCACCGTCACCCACAAGCCCGACATCAAGAAGTTCCAGGCCGCCACCCGCCTTCGCG
CCAAGGACCGGATCGAGGGCGGCAAGATCATCCGCGTCGAGGCTCACCCCATCCCCGAGCACCCGAGGCCTAAGAGGGTG
GCGGGGAGGGTGACGCTGGTGGGGGACGCGGCGGGGTACGTGACAAAGTGCTCCGGCGAGGGGATCTACTTCGCGGCGAA
GAGCGGGCGGATGTGCGCGGAGGCGATCGTGGCCGGGTCGGCGAACGGGACGCGGATGGTGGAGGAGAGCGACCTGCGCA
GGTACCTGGCCGAGTTCGACCGCCTCTACTGGCCGACGTACAAGGTGCTCGACGTGCTCCAGAAGGTGTTCTACCGCTCC
AACGCCGCCCGCGAGGCGTTCGTCGAGATGTGCGCCGACGACTACGTCCAGAGGATGACCTTCGACAGCTACCTCTACAA
GCGCGTCGTGCCGGGCAACCCGCTCGACGACATCAAGCTCGCCGTCAACACCATCGGCAGCCTCGTCCGCGCCACCGCCC
TCCGCCGCGAGATGGAGAAGGTCACCTTGTGA
ATGACCTCGCTGTCGTCCTCCGCCGCCGCGGCGCGCGCCACCTTCGTCATGCCGTCGTCGGTGCGTGGGGGCATGAGCCG
CGGCAGGAGGATGGCGAGGCTGGTGACGCGCGCGGCGGCGTCGAGCCCGAAGCTCCCGAGCGGGCGGCGGCTGCGGGTGG
CGGTGGTCGGAGGCGGACCCGCGGGCGGCGCGGCGGCGGAGGCGCTGGCCAAGGGCGGCGTGGAGACGGTGCTCATCGAA
CGGAAGCTGGACAACTGCAAGCCCTGCGGCGGGGCCATCCCGCTGTGCATGGTGTCGGAGTTCGACCTGCCGCTGGACCT
CGTCGACAGGAAGGTGAGGAAGATGAAGATGATTTCGCCGTCCAACGTCGCCGTCGACATCGGCGGCACGCTCGCGCCGC
ACGAGTACATCGGCATGGTCCGCCGCGAGGTGCTCGACGCCTACCTCCGCTCCCGCGCCGAGGGGGCCGGCGCCGAGGTC
GTCAATGGTCTCTTCCTGAGGTATGAGGCGCCCAAGGAACCCAACGGGTCGTACGTGGTGCACTACAACCACTACGACAG
CTCCAACGGCAAGGCCGGCGGCGAGAAGCGGACGTTCGAGGTGGACGCGATCGTGGGCGCGGACGGCGCCAACTCCCGCG
TCGCCAAGGACATGGGCGCCGGCGACTACGAGTACGCCATCGCGTTCCAGGAGCGCGTCAAGATCCCCGACGACAAGATG
AAGTACTACGAGGAGCGCGCCGAGATGTACGTCGGCGACGACGTCTCGCCGGACTTCTACGGCTGGGTGTTCCCCAAGTG
CGACCACGTCGCCGTCGGCACCGGCACCGTCACCCACAAGCCCGACATCAAGAAGTTCCAGGCCGCCACCCGCCTTCGCG
CCAAGGACCGGATCGAGGGCGGCAAGATCATCCGCGTCGAGGCTCACCCCATCCCCGAGCACCCGAGGCCTAAGAGGGTG
GCGGGGAGGGTGACGCTGGTGGGGGACGCGGCGGGGTACGTGACAAAGTGCTCCGGCGAGGGGATCTACTTCGCGGCGAA
GAGCGGGCGGATGTGCGCGGAGGCGATCGTGGCCGGGTCGGCGAACGGGACGCGGATGGTGGAGGAGAGCGACCTGCGCA
GGTACCTGGCCGAGTTCGACCGCCTCTACTGGCCGACGTACAAGGTGCTCGACGTGCTCCAGAAGGTGTTCTACCGCTCC
AACGCCGCCCGCGAGGCGTTCGTCGAGATGTGCGCCGACGACTACGTCCAGAGGATGACCTTCGACAGCTACCTCTACAA
GCGCGTCGTGCCGGGCAACCCGCTCGACGACATCAAGCTCGCCGTCAACACCATCGGCAGCCTCGTCCGCGCCACCGCCC
TCCGCCGCGAGATGGAGAAGGTCACCTTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI3G59430 | ortholog_one2one | 1 retrogene | |
| Zea mays | GRMZM2G105644 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI02G30980 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA06G04710 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC02G29860 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0744900 | ortholog_one2one | 1 retrogene | |
| Sorghum bicolor | Sb04g028050 | ortholog_one2one | 1 retrogene | |
| Triticum aestivum | Traes_6DL_0FF72D765 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oruf_42 | 57.64 | 92.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ORUFI02G34000 retrocopies