Parental gene:

ORUFI01G01660

Aliases:None
Description:None
Organism:Brownbeard rice (Oryza rufipogon)
Coordinates:1:1220419..1257728(-)


>ORUFI01G01660
ATGCCGCCGGCGGCAGATCCCCTCCCCAGTCGATCCGAGCAGAGCACGATGGGGGAGGACGGCGGCGGCGACGACGACGA
CGATGAGTCGTCGCCGACGACGACGGAGGAGGAAGGAGGCGATGGGGTTGAAACTCATCGATGGAAAATGATACCAAACC
ACAGCCAGCTACAACTCGAAGAAGATGAAGGCCGCCATGGCTACTTCGACCCTTCTCTTCCTCCTCCTCGCCGGCGCCGC
CCACGGCGCGCCGGAAGACACCACCACCAAGACCATACGCCTCCCGACCGACGGAGGATCAGCACAGCAGGCGCCGACGA
CGAAGAGGCCGTGGAACGGCTGCCGACGAAGACCAACCCGCCGCAGTGGCGCTGCAACGACGAGCTGGAGCCCAGCCAGT
GCGTGGCACAGTGCGAGGTGTGCCAGGAGGCGCCGGGGCCGTTCCCGGGGCCGCTCATCTGCAGCGACGTCTACTGGGGC
GCCGACCCGGGCCCCTTCTGCACGCCGCGGCCGTGGGGGGATTGCTGCACCAACACCACCTGCACCAGGTCGATCCCTCC
GATCTGCCGCTGCAACGACAGGGTGAAGAAGTGCGCCGCCGCGTGCAAGGATTGCAAGCGGGTGAAGTCGTCGAAGCCTC
CTCGCTACGTCTGCCAGGACCAGTTCACCGGCCAGCCAGGGCCCAAGTGCAAACACTCCGGCAATATGGCTACTTCTTCC
ATCCTTTTCTTCTTCCTCCTCGGCGGCCTCACCGTCGCCGTCGCCGCCCACGGCACGGCGAACGACGACACCAATACCAT
ACGCCTCCCCAGCGACGGAGCAAAGTCGCCGAAGATGCCGACGGAGAAGAGGCCGTGGAAGTGCTGCGACGACATCGAGG
AGCAGCCGGCGAGCATCTTCCCGCCGTTCTGGCGGTGCAACGACGAGCTGGAGCCCAGCCAGTGCGCCGCCCAGTGCGAG
GTGTGCCAGGACCAGGAGGCGTCGCCGGGCCGGCTCATCTGCGGCGACGTCTACTGGGGCGCCGACCCGGGCCCCTTCTG
CACGCCGAGGCCGTGGGGAGATTGCTGCGACATGGACATCTGCAGCAGGTCTCTCCCGCCGATCTGCCGGTGCGCCGACG
AGGTGGAGTCGTGCGCCGCCGCGTGCAAGGATTGCCAGCAGCTGGAGTCGTCGTCGTCGTCGTCGGAGCCTCCTCGCTAC
GTCTGCCATGATTGGTTCAGAGGCGAGCCAGGTTTCATTAGCATAGACTGTGGTATCCAGCCGAACACGAGCTACGTGCA
CAACACGACCAAGATATCCTACGTCGCCGACGACGACTTCACCGACGGCGGCTCCAACTACAACGTTTCGCCGGAGTACA
TCAAACCGCAGCTCTCGCAGCGGTACTACAACTTGCGTGCCTTCCCCGACGGTGCGCGCAACTGCTACACGGCCCGGTCG
CTGGCGCCTGGGATCAAGTACCTCATCCGCGCCTCTTTCTTGTATGGCAACTACGACGGCCTCAACAAGCTGCCGGTGTT
TCATCTCTACATTGGCGTCAACTTCTGGACCATGGTGAACATCACGAGCCTCGGCCTCGGCGGCTCTTATGAGGAGGCCA
TCGTGGTGGTGCCCGATGACTTCGTGCAGGTCTGCCTGATCAACACTGGCACCGGCACGCCCTTCATCTCCTCGCTGGAG
CTGAGGCCTCTGGACAAAAGGCTCTATCCGCAGGTGAACGCCACGCTGGGCCTCCTCCAGCTCAACCGCCTCAACTTTGG
CCCGACTGATAACAGCCTCGTCAGGTACCCAGATGACCCACATGACAGATTTTGGGGAAACTGGGACAGCTATACATCGA
GCTTATGGAAGGAGATATCCACGGCGTCGAGGGTAGATAACTTAGACGGAGACATATTCGATGCGCCGACGGCGGTGATG
CAGACGGCAGTGACGCCGCGCAACGCGTCAGGTAACATCTACTTCTTTTGGGAGCCTTGGCCGCAGCCCAACGACCCGAC
GCCGCCGTACACTGTCATCTTCCACTTCTCCGAGCTGGAGATCCTCACCAACAACGCCTCGCGCCAGTTCTACATCAATC
TCAACGGCGAACCGTTGATCGATACTGCTTACGAGCCGACATACCTTACAGCGAGATACTTATATGGCTTGGAGCCCCTT
GAAAGAACCTCCAGGTACAATATCACCATCAACGCTACCGCCAACTCGACGCTGCCGCCGCTCATCAACGCCGCCGAGAT
TTTCTCGATCATCTCCACCGCAGTCATCGGCACGGACTCGCAGGATGCATCTTCCATGATGGCGATCAAGGACAAGTACC
AAGTCAAGAAGAATTGGATGGGTGACCCGTGTATGCCAAAGACATTTGCGTGGGACAAGCTGACCTGCAGCTATCCCAAT
TCGAGCGGTGCAAGAATCATAAGCTTAAATCTGTCCTCCAGTGGTTTGAGTGCTGACATATCATCCGCTTTTGGGAATCT
CAAGGCTCTTCAATACTTGGATCTATCAAACAACAGTTTGACCGGCTCAATTCCGGATGTCCTCTCACAATTACCTTCCT
TGAGAGTTTTAGATCTGACAGGAAATCAACTCAGTGGATCAATTCCATCTGGAATTCTCAAGAGGATTCAAGATGGCTCC
TTAAATGTAAGATATGGAAATAATCCAAACCTATGCATCAACGGCAATTCATGCAAGGCAGCTAAAAAGAAGAGCAAGCT
AGCCATCTACACAGTTATTCCTGCAGTTCTGGTTGTATTGATAGCATCAGTTACAACACTCTTTTGCCTGCTGAGACGAA
AAAAGCAAGGACCAATGAACAATTCTCTAGAGCAGCAAAACGAGATGTCGACATCAACAAGCCACGTGCTGATAAATAGT
GGATATGGTGACAATGTATCGCTGCGGCTTGAGAACCGTCGGTTTACATATAAAGAACTAGAGAAGATAACCAACAAATT
CAAACGAGTGCTCGGACGGGGAGGGTTCGGATATGTCTACCATGGCTTCTTGGAGGATGGCACACAAGTGGCGGTCAAGT
TGCGATCTGAATCCTCAAGCCAAGGTGCTAAGGAGTTCCTCATAGAGGCTCAAATTTTGACCCGGATTCACCATAAGAAT
CTTGTATCTATGATCGGTTACTGCAAGGATGGGATATACATGGCTCTTGTCTACGAGTACATGCCAGAAGGAACCCTAGA
AGAACATATTGTAGGGCTAGAGTACCTACATAAAGGGTGCAATCCGCCTATTATTCACAGGGATGTGAAGGCGACCAACA
TCCTACTAAACACAAGGTTGGAGGCAAAGATTGCCGATTTTGGCTTGTCCAAGGCATTCAGCTATGACAACATCACCCAT
GTATCCACGAACGCTCTCGTTGGCACACTTGGATATGTCGATCCAGAGTACCAGATGACAATGCAAGCAACAACAAAGAG
CGATGTCTATAGCTTTGGCGTCGTCTTATTGGAGCTGGTCACTGGGAAGCCGGCTATCTTGCATGAACCAAACCCCATCA
GCGTCATCCACTGGACACGACAACGTCTAGCACGGGGTAACATCGAGGATGTTGTGGACACATGCATGCCTAGTGATTAT
GATGTAAATGGTGTGTGGAAGGCTATGGACATTGCGTTCACGTGCACTGCACAAGCATCGACACAACGACTCACTATGAC
TGAAGTGGTGATGCAGTTGCAAGAGTGTCTCGAGCTTGAGGATGCACGTTGTGCTATTGGCGATGCACACAACGAGTTCT
ACCCTGACCCTCGGAGCGACCACAATTTAAGTTATAACACGTATGTCTCGGACCGGTCCAACGATGTGAGTCAAAATAGT
GGCGTGTCTATGATGGAGCATAATTTTGGGAGGATGAGCAACACTACCATGGCTACTTCCACCATCCTGCTCTTCCTCCT
CGCCGGCCTCGCCGCCGCCCACGGCGACGGCGACACCACCATCCGTCTCCCCAGCGACGGCGCCAAAGCATCACGACCAC
GCGCCGCCAAACCATGGGACTGCTGCGACAACATCGAGATCTCCCGGCTAATGATCTACCCGCCACTGTACCGCTGCAAC
GACGAGGTGAAGCAGTGCGCCGCCGCCTGCAAGGAGTGCGTGGAGGCGCCCGGCGGCGACTTCAACGGCGGCGCCTTCGT
CTGCAGTGACTGGTTCTCGACGGTGGACCCCGGCCCCAAGTGCACGGCGGCGCTGGATGGGCTGTCGATGGAGAGGCCGT
GGAAGTGCTGCGACAACATCAAGCGGCTGCCGACGAAGCCCGACCCGCCGCAGTGGCGCTGCAACGACGAGCTGGAGCCC
AGCCAGTGCACCGCCGCGTGCAAGTCGTGCCGGGAGGCGCCGGGGCCATTCCCGGGGAAGCTCATCTGCGAGGACATCTA
CTGGGGCGCCGACCCGGGCCCCTTCTGCACGCCGCGGCCATGGGGAGATTGCTGCGACAAGGCCTTCTGCAACAAGATGA
ACCCGCCGACCTGCCGCTGCATGGACGAGGTGAAGGAGTGCGCCGACGCGTGCAAGGATTGCCAGCGCGTGGAGTCGTCG
GAGCCGCCTCGCTACGTCTGCAAGGACCGCTTCACCGGCCATCCCGGCCCCATGAGCAACACCACCATGGCTATTTCCAC
CATCCTTCTCTTCCTCCTCGCCGGCCTCGTCGCCGCCCACGGCGACGGCGACACCATGATCCGTCTCCCAAGCGACGGCG
CCGAAGCACCACCACGCCCGCCCAAACCCTGGGACTGCTGCGACAACATCGAGATGTCCCCGCTCGAGATCTTCCCGCCG
CTGTACCGCTGCAACGACGAGGTGAAGCAGTGCTCCGCCGCCTGCAAGGAGTGCGTGGAGGCGCCCGGCGACTTCCCCCG
CGGCGCCTTCGTGTGCCGCGACTGGTACTCGACGGTGGACCCGGGCCACATGTGCACGGCGCCGGATCAGCCGACGACGA
AGAGGCCGTGGAAGTGCTGTGACAGCATCGTGCAGCTGCCGCAGAGGATCTTCCCGCCGTTCTGGCGCTGCGACGACGAG
CTGGAGCCCGGCAAGTGCACCGCCGCGTGCAAGTCGTGCAGGGAGGCGCCGGGGCCGTTCCCGGGGCCGCTCATCTGCGA
GGACGTCTACTGGGGCGCCGACCCGGGCCCCTTGTGCACGCCGCGGCCATGGGGGAAATGCTGCGACAAGGCCTTCTGCA
ACAAGATGAACCCGCCGACCTGCCGCTGCATGGACGAGGTGAACAAGTGCGCCGCCGCGTGCAAGGATTGCCAGCGTGTG
GAGTCGTCAGAGCCGCCTCGCTACGTCTGCAAGGACCGCTTCACCGGCCAGCCCGGGCCCATCATGGCTACTTCCACCAT
CCTGCTCTTCCTCCTCGCCGTCGGCGGCCTCGCCGCCGCCCACGGCGACACCATCCGTCTCCCCAGCGAAGGCGACGCAC
CACCGCAGCCCGCCAAACCCTGGGACTGCTGCGACGATATCGAGATGTCCCCGCTAAAGATCTTCCCGCCGCTTTACCGC
TGCAACGACGAGGTCAAGCAGTGCTCGGCCGCCTGCAAGGAGTGCGTGGCGGCGCCGGCGGCCGGAGACTCCCCCTGCGG
CGGCGGCGCCGCCCTCGTCTGCCGCGACTGGTACTCGACGGAGGACCCCGGCAAGCCGTGCACGCCGGAGCGGGAATGGC
CGGAGCGGACGACGAAGAAGAGGCCGTGGAAGTGCTGCGACAACATCCGGCGGCTGCCGCCGAGGATCCACCCGCCGTTC
TGGCGCTGCGACGACGAGCTCAAGCCCGGCCAGTGCTTCGCCGCGTGCAAGGCTTGCCGGGAGGCGCCGGGGCCATTCCC
GGGGCCGCTCATCTGCGACGACGTCTACTGGGGCGCCGACCCGGGTCCCTTCTGCACGCCGCGGCCGTGGGGGGATTGCT
GCGACAACACCACCTGCACCAAGTCGATCCCTCCAATCTGCAGCTGCGGCGACAAGGTGGCGGCATGCGACGGCGCGTGC
AAGGATTGCCAGCCGGTGGCGTCGTCGTCGGAGCCGCCTCGCTTCGTAAAGAGCACCATGATGGCTGCTTCCATGCTGCT
CTTCCTCCTCGTCCTCGCCGGCATCGTCACCGCCACCACCACCGACAACAACATTCGCCTCCCCAGCAACGGCGCCGCCG
GCGAAACCGATGGAAACAAACAGGCGAAATCCAGACCGTGGGAGTGCTGCGACAACATCGAGATGTCCGTGAAGCAGTGC
GCCGCCGCCTGCGAGAACTGCCTGCGGCTGGTCCCCGGCGGCGAAGAAGATGTCTTCGTCTGCGACGACTGGTACCCGAC
CACCGACCATGGCCCCGTCTGCACGCCGAGGCCGTGGGGCGATTGCTGCGACAAGGCCTTCTGCACAAGGTCGCTTCCCC
CGATCTGCCAGTGCGCCGACGAGGTGGCGTCGTGCGCCGCCGCCTGCAAGGAGTGCGACATGGTGGAGTCGTCGGCGCCG
CCTCGCTTCATCTGCCGCGACCACTTCACCGGCGAGCCAGGGCCCAATCGACTAAGATGA

No homologs available

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oruf_41 58.47 73.16
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Download FASTA sequences of all ORUFI01G01660 retrocopies