Parental gene: | OPUNC09G08360 |
| Aliases: | None |
| Description: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Source:Projected from Arabidopsis thaliana (AT2G38740) TAIR;Acc:AT2G38740] |
| Organism: | Red rice (Oryza punctata) |
| Coordinates: | 9:16896220..16898272(-) |
>OPUNC09G08360
ATGGCGGCCGCCACTCCCAACGGCATCCCAACTTCCAGACCTCTGGCTTCATCTGTTACAATTGAGGCTGTTCTGTTCGA
CATTGATGGGACCTTGTGCGACTCAGATCCTCTTCATCATGTAGCCTTCCAAGAAATGCTTCTTGAGATTGGGTATAACA
ACGGTGTGCCAATAGACGAGGAGTTTTTCATAAACAATATTGCTGGAAGGAGTGATGTTGAAGCTGCTCAGAATTTGTTC
CCTGATTGGCCCCCTGAGAAGGGGCTGAAATTCCTCGAGGACAAGGAAGCTAAATACAGAAGTTTGGCGAAGGAGCGTTT
GGAACCTGTAAAGGGCCTTGCTAAAGTGGTTCAGTGGGTCAAAGATCATGGATACAAGCGTGCAGCTGTAACCAATGCCC
CCAGGATTAATTCCGAGCTCATGATCTCCCTTCTTGGCCTCACAGACTTCTTCCAGGCCATCATCGTTGGAGGTGAATGT
GAGAAGCCAAAACCTGCCCCATTCCCTTACCTGAAGGCTCTCAAGGAGCTTCAGGTGTCTGCAGACCACACCTTCATCTT
TGAGGATTCTGCTTCAGGCACACGTGCAGGCGTTGCTGCTGGAATTCCTGTCGTTGCTGTGGCAACAAGGAACCCAGAGA
AGTCCCTACTAGATGCAGGAGCCACCTTGATCATCAAGGATTATGAAGACCCCAAGCTTTGGAGCGCACTTGAAGAGATA
GACAGAGAGGAAGCCAAGCTAAAGAAAGCTGATGCATGA
ATGGCGGCCGCCACTCCCAACGGCATCCCAACTTCCAGACCTCTGGCTTCATCTGTTACAATTGAGGCTGTTCTGTTCGA
CATTGATGGGACCTTGTGCGACTCAGATCCTCTTCATCATGTAGCCTTCCAAGAAATGCTTCTTGAGATTGGGTATAACA
ACGGTGTGCCAATAGACGAGGAGTTTTTCATAAACAATATTGCTGGAAGGAGTGATGTTGAAGCTGCTCAGAATTTGTTC
CCTGATTGGCCCCCTGAGAAGGGGCTGAAATTCCTCGAGGACAAGGAAGCTAAATACAGAAGTTTGGCGAAGGAGCGTTT
GGAACCTGTAAAGGGCCTTGCTAAAGTGGTTCAGTGGGTCAAAGATCATGGATACAAGCGTGCAGCTGTAACCAATGCCC
CCAGGATTAATTCCGAGCTCATGATCTCCCTTCTTGGCCTCACAGACTTCTTCCAGGCCATCATCGTTGGAGGTGAATGT
GAGAAGCCAAAACCTGCCCCATTCCCTTACCTGAAGGCTCTCAAGGAGCTTCAGGTGTCTGCAGACCACACCTTCATCTT
TGAGGATTCTGCTTCAGGCACACGTGCAGGCGTTGCTGCTGGAATTCCTGTCGTTGCTGTGGCAACAAGGAACCCAGAGA
AGTCCCTACTAGATGCAGGAGCCACCTTGATCATCAAGGATTATGAAGACCCCAAGCTTTGGAGCGCACTTGAAGAGATA
GACAGAGAGGAAGCCAAGCTAAAGAAAGCTGATGCATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA029783 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART09G09890 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM09G10170 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI09G07660 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA09G0073400 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI09G10540 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS09G0407700 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opun_16 | 53.74 | 89.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OPUNC09G08360 retrocopies