Parental gene: | OPUNC03G13130 |
| Aliases: | None |
| Description: | None |
| Organism: | Red rice (Oryza punctata) |
| Coordinates: | 3:11298982..11301479(-) |
>OPUNC03G13130
ATGGAGACCCATATCGGATCCGTGGACGGGGCGGCGGCGGCGGCGGACAACGGCGCGGTGGGGTGCCCGGCGTCGGCGGT
GGGGTGCCCGATGACCTCGGCGCGGCCCGCGGCGGTGCCCGTGTCGGCCGGCGAGGCGTCGCTGGGGCGGCACCTGGCGA
GGAGGCTGGTGCAGGTGGGCGTCAGCGACGTGTTCGCCGTGCCAGGGGACTTCAACCTCACGCTGCTCGACCACCTGATC
GCGGAGCCCGGGCTGCGCCTCGTCGGCTGCTGCAACGAGCTCAACGCCGGGTACGCGGCCGACGGCTACGCCCGCGCCCG
CGGCGTGGGCGCCTGCGCCGTCACGTTCACCGTCGGCGGCCTCAGCGTGCTCAACGCCATCGCCGGCGCGTACAGCGAGA
ACCTGCCGGTCATCTGCATCGCCGGAGGGCCCAACTCCAACGACTACGGCACCAACCGCATCCTCCACCACACCATCGGC
CTCCCGGACTTCTCCCAGGAGCTCCGCTGCTTCCAGACCGTCACTTGCCACCAGGCGGTGGTGACCAATCTGGAGGATGC
GCACGAGCAGATCGACACCGCCATCGCGACGGCGCTGCGGGAGAGCAAGCCGGTGTACCTCAGCATCAGCTGCAATCTCC
CAGGGCTGCCTCACCCCACGTTTAGCCGCGACCCTGTCCCCTTCTTCCTCTCCCCCAGGTTGAGTAACAAGATGGGTCTG
GAGGCTGCGGTGGAGGCAACCGTCGAGTTCCTGAACAAGGCGGTGAAGCCGGTCCTCGTTGGCGGCCCCAAGCTGCGTGT
GGCAAAGGCAGGAAAGGCATTCGTCGACCTTGTCGATGCCAGTGGCTATGCCTACGCGGTGATGCCGTCGGCCAAGGGGC
TTGTGCCGGAGACACACCCCCACTTCATCGGCACCTACTGGGGCGCTGTCAGCACAGCCTTCTGTGCTGAGATCGTTGAG
TCGGCAGATGCCTACCTCTTTGCAGGGCCAATCTTCAATGACTACAGCTCTGTCGGCTACTCCTTCCTCCTCAAGAAGGA
CAAGGCCATCATTGTGCAACCGGAGCGTGTCATCGTCGGGAATGGCCCGGCGTTCGGGTGTGTCATGATGAAGGAGTTCT
TATCTGAGCTGGCTAAGCGTGTCAACAAGAACACCACTGCCTACGAGAACTACAAGAGGATCTTCGTACCCGAGGGCCAG
CCGCTGGAGAGCGAGCCGAATGAGCCGCTGCGTGTCAATGTGCTCTTCAAGCACGTCCAGAAGATGCTGAACAGGGACAG
TGCTGTGATCGCCGAGACTGGTGACTCCTGGTTCAATTGCCAGAAGCTGAAGCTCCCTGAGGGCTGCGGGTATGAATTCC
AAATGCAGTATGGTTCCATTGGATGGTCAGTGGGTGCATTGCTCGGATATGCTCAGGGCGCTAAGGACAAGCGTGTGATT
GCCTGTATTGGTGATGGGAGTTTCCAGGTGACGGCACAGGATGTGTCAACAATGCTGCGCTGCGCGCAGAACAGCATAAT
CTTCCTGATCAACAACGGCGGGTACACCATTGAGGTGGAGATCCATGATGGTCCATACAACGTCATCAAGAACTGGAACT
ACACTGGCCTTGTGGATGCCATCCACAATGGAGAGGGCAAATGCTGGACTTCTAAGGTGAAGTGCGAGGAGGAGCTGACG
GACGCAATCAGCACAGCGCTGGGGGAGAAGAAGGACTGTATGTGCTTCATTGAGGTGATCGCGCACAAGGACGACACCAG
CAAAGAGCTGCTGGAATGGGGATCGAGGGTTTCTGCTGCCAACTCCAGGCCACCGAATCCTCAGTAG
ATGGAGACCCATATCGGATCCGTGGACGGGGCGGCGGCGGCGGCGGACAACGGCGCGGTGGGGTGCCCGGCGTCGGCGGT
GGGGTGCCCGATGACCTCGGCGCGGCCCGCGGCGGTGCCCGTGTCGGCCGGCGAGGCGTCGCTGGGGCGGCACCTGGCGA
GGAGGCTGGTGCAGGTGGGCGTCAGCGACGTGTTCGCCGTGCCAGGGGACTTCAACCTCACGCTGCTCGACCACCTGATC
GCGGAGCCCGGGCTGCGCCTCGTCGGCTGCTGCAACGAGCTCAACGCCGGGTACGCGGCCGACGGCTACGCCCGCGCCCG
CGGCGTGGGCGCCTGCGCCGTCACGTTCACCGTCGGCGGCCTCAGCGTGCTCAACGCCATCGCCGGCGCGTACAGCGAGA
ACCTGCCGGTCATCTGCATCGCCGGAGGGCCCAACTCCAACGACTACGGCACCAACCGCATCCTCCACCACACCATCGGC
CTCCCGGACTTCTCCCAGGAGCTCCGCTGCTTCCAGACCGTCACTTGCCACCAGGCGGTGGTGACCAATCTGGAGGATGC
GCACGAGCAGATCGACACCGCCATCGCGACGGCGCTGCGGGAGAGCAAGCCGGTGTACCTCAGCATCAGCTGCAATCTCC
CAGGGCTGCCTCACCCCACGTTTAGCCGCGACCCTGTCCCCTTCTTCCTCTCCCCCAGGTTGAGTAACAAGATGGGTCTG
GAGGCTGCGGTGGAGGCAACCGTCGAGTTCCTGAACAAGGCGGTGAAGCCGGTCCTCGTTGGCGGCCCCAAGCTGCGTGT
GGCAAAGGCAGGAAAGGCATTCGTCGACCTTGTCGATGCCAGTGGCTATGCCTACGCGGTGATGCCGTCGGCCAAGGGGC
TTGTGCCGGAGACACACCCCCACTTCATCGGCACCTACTGGGGCGCTGTCAGCACAGCCTTCTGTGCTGAGATCGTTGAG
TCGGCAGATGCCTACCTCTTTGCAGGGCCAATCTTCAATGACTACAGCTCTGTCGGCTACTCCTTCCTCCTCAAGAAGGA
CAAGGCCATCATTGTGCAACCGGAGCGTGTCATCGTCGGGAATGGCCCGGCGTTCGGGTGTGTCATGATGAAGGAGTTCT
TATCTGAGCTGGCTAAGCGTGTCAACAAGAACACCACTGCCTACGAGAACTACAAGAGGATCTTCGTACCCGAGGGCCAG
CCGCTGGAGAGCGAGCCGAATGAGCCGCTGCGTGTCAATGTGCTCTTCAAGCACGTCCAGAAGATGCTGAACAGGGACAG
TGCTGTGATCGCCGAGACTGGTGACTCCTGGTTCAATTGCCAGAAGCTGAAGCTCCCTGAGGGCTGCGGGTATGAATTCC
AAATGCAGTATGGTTCCATTGGATGGTCAGTGGGTGCATTGCTCGGATATGCTCAGGGCGCTAAGGACAAGCGTGTGATT
GCCTGTATTGGTGATGGGAGTTTCCAGGTGACGGCACAGGATGTGTCAACAATGCTGCGCTGCGCGCAGAACAGCATAAT
CTTCCTGATCAACAACGGCGGGTACACCATTGAGGTGGAGATCCATGATGGTCCATACAACGTCATCAAGAACTGGAACT
ACACTGGCCTTGTGGATGCCATCCACAATGGAGAGGGCAAATGCTGGACTTCTAAGGTGAAGTGCGAGGAGGAGCTGACG
GACGCAATCAGCACAGCGCTGGGGGAGAAGAAGGACTGTATGTGCTTCATTGAGGTGATCGCGCACAAGGACGACACCAG
CAAAGAGCTGCTGGAATGGGGATCGAGGGTTTCTGCTGCCAACTCCAGGCCACCGAATCCTCAGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Zea mays | GRMZM2G087186 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART03G13620 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM03G13720 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI02G33690 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI03G14280 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opun_18 | 83.42 | 94.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OPUNC03G13130 retrocopies