Parental gene: | OGLUM01G30230 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza glumaepatula |
| Coordinates: | 1:30197866..30200053(+) |
>OGLUM01G30230
ATGTGGCCTCTCCTCCTCCGCGCCGCCGTCGTCTACGCGGCGCTGCTCGCCGCCGGCGAGGCGGACGGCTCCCACGATGT
CCTCGACATCTTCGGCACGCGCTCCGAGAGCGACTACTACTGTAACGCGTTCCAGGGGAGGCAGGGGCAGGCGGTGCCGC
TGCCGCGTGGAGGCGGCCTCCGCCGCGAGCAGCAGGAGCTCGGCGCCGCGGGCCCGGGCGGTAGCGGGCTCTCGAAGGCG
CCGCCTCGGTCCGTGCCCAGCAAGGTGGCTCTGGACAGCCTGAAGCTCCCCGTGGACACCTCCGCGGGCTTCGCTGGCGG
GTGGAACCTGGTGAGCGAGAACTCCGGCGTGTCCGCCATGCACCTGGTGGTCATGCGGCACGGCAAGGCCATCATGTTCG
ACACGTGCACGACGGGACGTTCGCTGATGCGGCTGCCCCCGGGCAGATGCCGCCCTGACCCCCGGAGCAAGCAGCCCGGC
GCCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAACACCGGCGCGCTCCGCTCTCTCAAGATCGTGACGGACAC
GTGGTGCTCGTCGGGGGCGTTCGACGCCGACGGCAACATGGTGCAGACCGGCGGCTTCTTCGAAGGGGACAAGTCTGTCA
GGTACCTGAGCGCATGCGGCACCTGCGACTGGAAGGAGTTTCCCAAGAGCCTTGCCGATGGAAGATGGTACGGGACGCAG
CTGGTGCTCCCGGACGGCAGTTTCATCGTGATCGGCGGCCGACGCGCGTTCAGCTACGAGTTCGTCCCGGCGGCCGGCCG
GGCAAACGCCAGGGCCACGCCTTTGCGTCTGCTCCGGGACACCACCGACGACGTGGAGAACAACCTGTACCCCTTCGTCA
ACCTCCTCCCGGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCATCGTGTTCAACTACAGGACCGGGCAGGTCGTA
CGCGAGCTTCCGATCCTCCCCGGCGGCGCCCGGAACTACCCTGCCTCCGCCATGTCGACGCTTCTGCCCCTGGACCTCCG
CAAAGGGGCCGGCCTTAGCGCGGAGGTCATCATCTGCGGCGGCGCCACCAAGAATGCCTTCAAGCTCGGCGAGACCGGCA
CGTTCCCTCCCGCGCTCCGGGACTGCGCGCGCATCAACCCGTCGAAACCCGGGGCGCGGTGGGCGCTCGACCAGATGCCC
TCGGGCCGCGTCATGGGCGACGTGCTGATCCTGCCCACCGGCGACCTGCTCATGCTGAACGGCGCCGCCAAGGGCTGCTC
CGGCTGGGGGTTCGGCCGGCAGGCGTTGCTGAGCCCTGTGCTGTACTCGCCGTATCTGCGGCGGGGCAAGCGGTTCCGCG
TTCTGAACCCGTCGAACATCCCACGGATGTACCACTCCACCAGCGCGCTTCTCCCCGACGCCACCGTGCTCGTGGCCGGC
AGCAACACCAACTCGGCCTACAACTTCAGCGGCGTGGACTTCCCGACCGAGGTGCGCGTCGAGCGGTTCACCCCGCCGTA
CCTCGGCCCGCAGCTGTCCCCCAACCGGCCGGCGATCGACGCGGCGTCCGTCCCCGGCGACGGCATGCGGTACGGCGCCA
GGTTCACGTTCCGGTTCACGACGCCCGCGCAGGGCGTGGGGCAGGGCGACGTCAAGGTGACCATGTACGCGCCGCCGTTC
ACGACGCATGGGTACTCCATGAACCAGCGGCTGCTGATACTGCCCGTCACGGCGTTCGCCGCGCAGGGGCAGCGGCACAC
GATCACCGTCGACGCGCCGCCCAAGCCGGAGCTCGCGCCGCCGGGTTACTACATGGTGTACGTGGTGGCGAAGGGGGTGC
CGAGCAAGGCTGCGTGGGTGAAGATGCACAAGTAA
ATGTGGCCTCTCCTCCTCCGCGCCGCCGTCGTCTACGCGGCGCTGCTCGCCGCCGGCGAGGCGGACGGCTCCCACGATGT
CCTCGACATCTTCGGCACGCGCTCCGAGAGCGACTACTACTGTAACGCGTTCCAGGGGAGGCAGGGGCAGGCGGTGCCGC
TGCCGCGTGGAGGCGGCCTCCGCCGCGAGCAGCAGGAGCTCGGCGCCGCGGGCCCGGGCGGTAGCGGGCTCTCGAAGGCG
CCGCCTCGGTCCGTGCCCAGCAAGGTGGCTCTGGACAGCCTGAAGCTCCCCGTGGACACCTCCGCGGGCTTCGCTGGCGG
GTGGAACCTGGTGAGCGAGAACTCCGGCGTGTCCGCCATGCACCTGGTGGTCATGCGGCACGGCAAGGCCATCATGTTCG
ACACGTGCACGACGGGACGTTCGCTGATGCGGCTGCCCCCGGGCAGATGCCGCCCTGACCCCCGGAGCAAGCAGCCCGGC
GCCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAACACCGGCGCGCTCCGCTCTCTCAAGATCGTGACGGACAC
GTGGTGCTCGTCGGGGGCGTTCGACGCCGACGGCAACATGGTGCAGACCGGCGGCTTCTTCGAAGGGGACAAGTCTGTCA
GGTACCTGAGCGCATGCGGCACCTGCGACTGGAAGGAGTTTCCCAAGAGCCTTGCCGATGGAAGATGGTACGGGACGCAG
CTGGTGCTCCCGGACGGCAGTTTCATCGTGATCGGCGGCCGACGCGCGTTCAGCTACGAGTTCGTCCCGGCGGCCGGCCG
GGCAAACGCCAGGGCCACGCCTTTGCGTCTGCTCCGGGACACCACCGACGACGTGGAGAACAACCTGTACCCCTTCGTCA
ACCTCCTCCCGGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCATCGTGTTCAACTACAGGACCGGGCAGGTCGTA
CGCGAGCTTCCGATCCTCCCCGGCGGCGCCCGGAACTACCCTGCCTCCGCCATGTCGACGCTTCTGCCCCTGGACCTCCG
CAAAGGGGCCGGCCTTAGCGCGGAGGTCATCATCTGCGGCGGCGCCACCAAGAATGCCTTCAAGCTCGGCGAGACCGGCA
CGTTCCCTCCCGCGCTCCGGGACTGCGCGCGCATCAACCCGTCGAAACCCGGGGCGCGGTGGGCGCTCGACCAGATGCCC
TCGGGCCGCGTCATGGGCGACGTGCTGATCCTGCCCACCGGCGACCTGCTCATGCTGAACGGCGCCGCCAAGGGCTGCTC
CGGCTGGGGGTTCGGCCGGCAGGCGTTGCTGAGCCCTGTGCTGTACTCGCCGTATCTGCGGCGGGGCAAGCGGTTCCGCG
TTCTGAACCCGTCGAACATCCCACGGATGTACCACTCCACCAGCGCGCTTCTCCCCGACGCCACCGTGCTCGTGGCCGGC
AGCAACACCAACTCGGCCTACAACTTCAGCGGCGTGGACTTCCCGACCGAGGTGCGCGTCGAGCGGTTCACCCCGCCGTA
CCTCGGCCCGCAGCTGTCCCCCAACCGGCCGGCGATCGACGCGGCGTCCGTCCCCGGCGACGGCATGCGGTACGGCGCCA
GGTTCACGTTCCGGTTCACGACGCCCGCGCAGGGCGTGGGGCAGGGCGACGTCAAGGTGACCATGTACGCGCCGCCGTTC
ACGACGCATGGGTACTCCATGAACCAGCGGCTGCTGATACTGCCCGTCACGGCGTTCGCCGCGCAGGGGCAGCGGCACAC
GATCACCGTCGACGCGCCGCCCAAGCCGGAGCTCGCGCCGCCGGGTTACTACATGGTGTACGTGGTGGCGAAGGGGGTGC
CGAGCAAGGCTGCGTGGGTGAAGATGCACAAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA004194 | ortholog_one2one | 1 retrogene | |
| Brachypodium distachyon | BRADI2G46477 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI01G24080 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0215900 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0677000 | ortholog_one2one | 1 retrogene | |
| Setaria italica | Si004698m.g | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oglu_1 | 71.94 | 89.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OGLUM01G30230 retrocopies