Parental gene: | LPERR02G02000 |
| Aliases: | None |
| Description: | None |
| Organism: | Leersia perrieri |
| Coordinates: | 2:1227834..1231351(-) |
>LPERR02G02000
ATGCCGCTCTCCTACTCCGCCGCCGCCGCCGCGCCGCCGTGTCCTCTCGCCGCCCGCAGCCGGAGCCTCCTCCACCGGCC
GCGCCCAGGCCCCGTCGTCGTGAGGTGTAAAAAGATTGATCAGTTGAGGGCGGTCAATGGAATACCACCATACGCTCCGG
TGTCTAACAGGTCGTTGTTGACTCCTGTAACGCTGCCAATTATCCGGGATGCCAACGTTAAGAACGATACAAGGTTGCGT
ATCTTCTCAGGCACTGCCAATCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGTTTAGAACTTGGGAAGATTAACAT
AAAAAGGTTCGCTGATGGCGAAATATATGTTCAGTTACAAGAAAGTGTAAGGGGATGTGATGTTTTCCTTGTGCAACCAA
CATGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAGAACATT
ACTGCCGTTATCCCTTATTTTGGTTATGCTAGAGCTGACAGGAAGTCTCAAGGTCGTGAATCTATAGCTGCAAAACTTGT
TGCTAATATGATTACAGAAGCTGGTGCAAACCGTGTCCTTGTCTGTGATCTTCATTCCAGTCAAGCCATGGGATACTTTG
ACATCCCAGTAGATCATGTTTATGGTCAGCCGGTGATTCTTGATTACCTCGCTAGCAAGACAATTTGTTCAAACGATTTG
GTGGTTGTGTCTCCTGATGTTGGAGGTGTTGCCAGGGCACGCGCTTTTGCCAAAAAGCTATCAGATGCACCTCTGGCAAT
TGTTGATAAAAGAAGGCATGGACACAATGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGATGGATG
ATATGATCGACACAGCTGGAACTATTGCAAAAGGGGCTGAATTACTACATCAAGAAGGAGCAAGAGAAGTCTATGCATGC
TGTACACATGCTGTTTTCAGCCCGCCTGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATCATCACAAACAC
TATACCTCTCAAGGAGGACAAGAGTTTCCCGCAGCTGACTATCCTGTCAGTTGCTAACCTTTTAGGCGAGACAATCTGGC
GTGTGCATGACGATTGCTCAGTTGGTCATGAGCCGTACTCTAGTTTGGACATTGACTGA
ATGCCGCTCTCCTACTCCGCCGCCGCCGCCGCGCCGCCGTGTCCTCTCGCCGCCCGCAGCCGGAGCCTCCTCCACCGGCC
GCGCCCAGGCCCCGTCGTCGTGAGGTGTAAAAAGATTGATCAGTTGAGGGCGGTCAATGGAATACCACCATACGCTCCGG
TGTCTAACAGGTCGTTGTTGACTCCTGTAACGCTGCCAATTATCCGGGATGCCAACGTTAAGAACGATACAAGGTTGCGT
ATCTTCTCAGGCACTGCCAATCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGTTTAGAACTTGGGAAGATTAACAT
AAAAAGGTTCGCTGATGGCGAAATATATGTTCAGTTACAAGAAAGTGTAAGGGGATGTGATGTTTTCCTTGTGCAACCAA
CATGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAGAACATT
ACTGCCGTTATCCCTTATTTTGGTTATGCTAGAGCTGACAGGAAGTCTCAAGGTCGTGAATCTATAGCTGCAAAACTTGT
TGCTAATATGATTACAGAAGCTGGTGCAAACCGTGTCCTTGTCTGTGATCTTCATTCCAGTCAAGCCATGGGATACTTTG
ACATCCCAGTAGATCATGTTTATGGTCAGCCGGTGATTCTTGATTACCTCGCTAGCAAGACAATTTGTTCAAACGATTTG
GTGGTTGTGTCTCCTGATGTTGGAGGTGTTGCCAGGGCACGCGCTTTTGCCAAAAAGCTATCAGATGCACCTCTGGCAAT
TGTTGATAAAAGAAGGCATGGACACAATGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGATGGATG
ATATGATCGACACAGCTGGAACTATTGCAAAAGGGGCTGAATTACTACATCAAGAAGGAGCAAGAGAAGTCTATGCATGC
TGTACACATGCTGTTTTCAGCCCGCCTGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATCATCACAAACAC
TATACCTCTCAAGGAGGACAAGAGTTTCCCGCAGCTGACTATCCTGTCAGTTGCTAACCTTTTAGGCGAGACAATCTGGC
GTGTGCATGACGATTGCTCAGTTGGTCATGAGCCGTACTCTAGTTTGGACATTGACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI3G02680 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB02G12100 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART02G02200 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM02G02060 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA02G02120 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC02G01640 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI02G02210 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0127700 | ortholog_one2one | 1 retrogene | |
| Triticum aestivum | Traes_6AS_88F0CBEC0 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lper_21 | 82.79 | 77.55 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all LPERR02G02000 retrocopies