Parental gene:

TBPH, FBgn0025790

Aliases:None
Description:TAR DNA-binding protein-43 homolog [Source:FlyBase gene name;Acc:FBgn0025790]
Organism:Fruit fly (Drosophila melanogaster)
Coordinates:2R:19746589..19750135(-)


>FBgn0025790
ATGGATTTCGTTCAAGTGTCGGAGGAGGAGGGCGACGAGCCCATCGAGCTGCCGGCTGAGGAGGATGGCACTCTGCTTCT
GTCCACACTGCAAGCTCAGTTCCCTGGATCCTGCGGTCTGAAGTACCGCAACCTGGACACGAAGGCTGTGCGCGGAGTTC
GCTCCAACGAGGGCAGACTGTTTCCGCCCAGCGTGGAGTCCGGCTGGGGCGAGTACGCTTACTTTTGCGTCTTTCCCAAG
GAGAACAAGCGCAAGAGCGACGATAACTTGGAGAACTCAACTGCCAAGACCAAACGCATCGAGACCCGTCTGCGCTGCAC
TGATCTCATCGTGCTCGGCTTGCCGTGGAAGACCACAGAGGAGAGCTTGCGTGAGTACTTCGAGACCTACGGCGAGGTGC
TGATGGCCCAGATCAAGAAGGACACCAAGTCGGGCCAGTCCAAGGGCTTCGGTTTCGTGCGCTTCGGCTCTTACGATGCC
CAGATGCGCGTGCTCACCAATCGCCATCTGATCGACGGTCGCTGGTGCGAGGTTAAGGTGCCCAACTCGAAGGGCATGGG
CCACCAGGTGCCTTGCAAGGTGTTCGTGGGCCGCTGCACCGAGGACATTAACTCGGACGACTTGCGCGAGTATTTCTCCA
AGTTTGGCGAAGTCACTGATGTGTTCATTCCCCGGCCCTTCAGGGCCTTTAGCTTTGTAACCTTCCTTGATCCCGACGTG
GCACAGTCCCTGTGCGGAGAGGATCACATTATCAAGGGCGTTTCGGTCCATGTGTCGAATGCTGCTCCAAAGGCCGAGCA
GAACAGAAACCAACAGGTCCAGAGCTACAACTACAACTCTGCCAACAGCTTTGGCATGCACTCATACCACCCACAGGGTA
ACCACATGAATCCGGGCCGCAACGGACACCACCGAGGTAATAACCAACACAATGCTCACGGCGGTGAGAACGCAATTGTG
CCCAATAATCACAACATTGGCACCGCCGGCTACGGCATGGGTGGCAACAATTACGGCGGCAACTCGGGCGGGGGCTACCA
CAACAATGGCGGCAATCACTCCAGTGGCGGGAACACGAACCGCCAGGACGGCGGCAGCCAGTACAACAGTCGCCAGTCGA
ATTTTCACGGAATGAACCAGCCGCATAACGGCAACGTGGGCGGCAGCAACGGCTGGATGAACCGTGGCCACCTGGACATG
CCCAACCTGCAGGCCCTGGGCATCAACTCGCAGGGATCGAGCTCCTCCAACCAGGGCCAAAACATGAGCAACCAGTCAAT
GCTCAATCTCAACTCATTGCCCATCAATCCCGCACTGGTCGCTGCCGCCTTGAACCAGTGGAGCCTGGTCGGCAACCAGC
TGCAGAACCAAAACCAGGACCAACAGGGCGGCAATTTTCTATCTTGGATGGCTCAGAACGGGGGCCACAACAATGCCAAC
AACTTTGGTGGACGGAAGGGGCCGAATAACCCGAACAACAATCCGGCCGCCAACGGAATAAAGACCGACAACTCGGAGCC
ACAGAATGGGAACACCGGTTGGTCGAACCAGAGCAGCGGATCTCAAAACGCCGCGGAGAAGTCAAACTTTCTTTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002381 possible_ortholog 2 retrogenes
retro_cjac_2457, retro_cjac_525,
Dasypus novemcinctus ENSDNOG00000008531 possible_ortholog 1 retrogene
retro_dnov_2262,
Homo sapiens ENSG00000120948 possible_ortholog 2 retrogenes
retro_hsap_1209, retro_hsap_3637,
Macaca mulatta ENSMMUG00000007456 possible_ortholog 1 retrogene
retro_mmul_1847,
Mus musculus ENSMUSG00000041459 possible_ortholog 1 retrogene
retro_mmus_1958,
Nomascus leucogenys ENSNLEG00000009512 possible_ortholog 2 retrogenes
retro_nleu_201, retro_nleu_819,
Pongo abelii ENSPPYG00000001894 possible_ortholog 1 retrogene
retro_pabe_1008,
Pan troglodytes ENSPTRG00000000136 possible_ortholog 2 retrogenes
retro_ptro_2460, retro_ptro_828,
Sus scrofa ENSSSCG00000023126 possible_ortholog 1 retrogene
retro_sscr_652,
Tarsius syrichta ENSTSYG00000004077 possible_ortholog 1 retrogene
retro_tsyr_2004,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dmel_17 73.40 58.38
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Download FASTA sequences of all FBgn0025790 retrocopies