Parental gene: | pspc1, ENSXMAG00000007929 |
| Aliases: | None |
| Description: | paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530] |
| Organism: | Platyfish (Xiphophorus maculatus) |
| Coordinates: | JH556962.1:442893..453901(+) |
>ENSXMAG00000007929
ATGGCCAACCGAAATATGCACCAAGCGAGGATGCCTGGTGCTAACTCTCCTCAGCCGGGGAGGAGAGGGACGGACTCCCC
GGCCTCGTCGGAGCCGACGCCGGCGAACAAAGGCAGTCCGGCCCCGCCGCAGCAACAGTCTCCCGCGGCCGACCAAAGCG
AAGGAGCCGCGGAGGAAACGGGGGAATGCCCGTCGAAAATGACTCTGGATATAGCAAGTTTTCGGAAGCCCGGAGAGAAG
ACGTTCACCCAGCGCTCCCGCCTCTTTGTCGGCAGCCTGCCGCTGGACATCACGGAGGAGGAGTTCAGGAACCTGTTCGC
TAAATATGGGAACATTAACGAGGTGTTCATCAACAGGGAGCGGGGATTTGGATTCGTTTGCTTGGAAACCCGAACTCTGG
CGGAGATTGCTAAAGTCGAGCTGGACGGGTCGGTTCTGAGCAACAGAGCACTAAAGGTCCGCTTCGCGACGCACGGAGCC
GCACTCAAAGTCCGCAATCTGCTGCCAGTGGTGACAAACGAACTCCTTGAAGAAGCGTTTTCTCAGTTTGGACCTGTGGA
GCGGGCCATTGTTGTGACGGACGACCGCGGCCGTTCCACTGGGAGAGGCATCGTTGAGTTTGCAAGCAAAGTCGCCGCCC
GTAAAGCCCTGGAGCGCTGCAACGAGGGAGCGATGCTGCTGACGACTACTCCATGTCCCACCATCGTGGAGCCAATGGAG
CACCTGGACGATGAAGATGGTCTACCTGAAAAGATTCTGCCAAAAACTCCAAAGTATTACAAAGAGCGGGAGCAGACGCC
CCGATTCGCCCAGCCTGGCACGTTCGAGTTTGAATACGCGTCTCGCTGGAAAGCTCTGGATGAGATGGAGAAGCAGCAGC
GGGAGCAGGTCGACCGAAACATCAAGGAGGCCAGAGAGAAACTGGAGGCGGAGCTGGAGGCCGCCAAAAACGAACATCAG
CTCATGTTGATGAGACAAGATCTATTGAGACGTCAGGAGGAACTGCGGCGGCTGGAGGAGCTGCGAAATCAGGAGCTGCA
AAGACGAAAGCAGATAGAAATGAGGCATGAGGAGGAGCGAAGGAGGAGAGAGGAGGAGATGATGAGGCACAGGGAGCAGG
ACGAGCTGAGACGGCAGCCCGACGGCGGCGGCTTCGTTCCAAACTACCATGAAAACAGGGAACAGGAAATGAGAGTGGGT
GAGCTGGGCCCTCGTGGAGCCGGTAATATGGGAGATGGGTTTAACCAGGCCTCTGGAGGGCCCAGTGGTAACCAGGGGCA
AATGATGGGCGGGAGTGGAAGGGGAGGAGCCATTGCCCCAGAGGGAACGTCAAATATGGGGACACCTTTGATGTCAGAGA
ATGGAGCCATGCGTAACGATAGGTACTCTCAGGGCGGATCAATGGGCGGTCGATCGGAAGTCGAGTCCCCAAAGCAACAG
CAGCAGCCATTGGGGCCTCAGGGTGGACCAGCTCCCGGATATAGCAGAGGCAGTCCAAGTCCAGGAGTCTTTGACGGCCC
AAATAACAAACGCCGGCGATACTAA
ATGGCCAACCGAAATATGCACCAAGCGAGGATGCCTGGTGCTAACTCTCCTCAGCCGGGGAGGAGAGGGACGGACTCCCC
GGCCTCGTCGGAGCCGACGCCGGCGAACAAAGGCAGTCCGGCCCCGCCGCAGCAACAGTCTCCCGCGGCCGACCAAAGCG
AAGGAGCCGCGGAGGAAACGGGGGAATGCCCGTCGAAAATGACTCTGGATATAGCAAGTTTTCGGAAGCCCGGAGAGAAG
ACGTTCACCCAGCGCTCCCGCCTCTTTGTCGGCAGCCTGCCGCTGGACATCACGGAGGAGGAGTTCAGGAACCTGTTCGC
TAAATATGGGAACATTAACGAGGTGTTCATCAACAGGGAGCGGGGATTTGGATTCGTTTGCTTGGAAACCCGAACTCTGG
CGGAGATTGCTAAAGTCGAGCTGGACGGGTCGGTTCTGAGCAACAGAGCACTAAAGGTCCGCTTCGCGACGCACGGAGCC
GCACTCAAAGTCCGCAATCTGCTGCCAGTGGTGACAAACGAACTCCTTGAAGAAGCGTTTTCTCAGTTTGGACCTGTGGA
GCGGGCCATTGTTGTGACGGACGACCGCGGCCGTTCCACTGGGAGAGGCATCGTTGAGTTTGCAAGCAAAGTCGCCGCCC
GTAAAGCCCTGGAGCGCTGCAACGAGGGAGCGATGCTGCTGACGACTACTCCATGTCCCACCATCGTGGAGCCAATGGAG
CACCTGGACGATGAAGATGGTCTACCTGAAAAGATTCTGCCAAAAACTCCAAAGTATTACAAAGAGCGGGAGCAGACGCC
CCGATTCGCCCAGCCTGGCACGTTCGAGTTTGAATACGCGTCTCGCTGGAAAGCTCTGGATGAGATGGAGAAGCAGCAGC
GGGAGCAGGTCGACCGAAACATCAAGGAGGCCAGAGAGAAACTGGAGGCGGAGCTGGAGGCCGCCAAAAACGAACATCAG
CTCATGTTGATGAGACAAGATCTATTGAGACGTCAGGAGGAACTGCGGCGGCTGGAGGAGCTGCGAAATCAGGAGCTGCA
AAGACGAAAGCAGATAGAAATGAGGCATGAGGAGGAGCGAAGGAGGAGAGAGGAGGAGATGATGAGGCACAGGGAGCAGG
ACGAGCTGAGACGGCAGCCCGACGGCGGCGGCTTCGTTCCAAACTACCATGAAAACAGGGAACAGGAAATGAGAGTGGGT
GAGCTGGGCCCTCGTGGAGCCGGTAATATGGGAGATGGGTTTAACCAGGCCTCTGGAGGGCCCAGTGGTAACCAGGGGCA
AATGATGGGCGGGAGTGGAAGGGGAGGAGCCATTGCCCCAGAGGGAACGTCAAATATGGGGACACCTTTGATGTCAGAGA
ATGGAGCCATGCGTAACGATAGGTACTCTCAGGGCGGATCAATGGGCGGTCGATCGGAAGTCGAGTCCCCAAAGCAACAG
CAGCAGCCATTGGGGCCTCAGGGTGGACCAGCTCCCGGATATAGCAGAGGCAGTCCAAGTCCAGGAGTCTTTGACGGCCC
AAATAACAAACGCCGGCGATACTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000011078 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000002361 | ortholog_one2one | 2 retrogenes | |
| Drosophila melanogaster | FBgn0004227 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xmac_3 | 60.44 | 77.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXMAG00000007929 retrocopies