Parental gene: | dse, ENSXETG00000032776 |
| Aliases: | None |
| Description: | dermatan sulfate epimerase precursor [Source:RefSeq peptide;Acc:NP_001120268] |
| Organism: | Xenopus (Xenopus tropicalis) |
| Coordinates: | GL172994.1:595225..616396(-) |
>ENSXETG00000032776
TGTATCAAAGATGGTCTGGCAGAGCTGGTGGCCTGGAGATCTAATGTCACAATGAGGACTCACACTCGGGGAGCCCCCAG
TGTATTTTTCATACATTTGCTTTGTTACATTGTGGTTTACTGCACAGAAAAGGACATAAATACACAAATACCATTCCTTA
ATGCAAAATATGATGGCTATCCCATGCTATACTTCTCCAAGGGTGAGATGGAAACACTTCGAGCCCAGGCAGCGAGCAGC
CATCAGCACATTTCTGCAAGAATTAATGAGGCAGTTCATGTAATGCTGACCAACCCTAGTGAGTACCTTCCCCCATGGGA
TCCAAAGGAGTTTTCTGCTCGATGGAATGAAATTTACGGCAACAACCTTGGTGCGCTGGCAATGTACTGCGTTTTGAATC
CAGATAACACTGAAGCACTTGGCCTGGCCAGAGAATATATGGAAAGGATGGCAGCTCAGCCTAGTTGGTTAGTGAAAGAT
GCTCCATGGGATGAAGTTCCCTTGGCACACTCTCTGGTTGGCTTTGCTACAGCTTATGACTTTCTTTACAACTCCTTTAG
CAAGCAACAGAAGGTGAGGTTTCTAGAGGTAATCGCCAACGCCTCCGTAAATATGTATGAAACCTCATTCAGGAGAGGAT
GGGGCTTTCAGTACATTCACAACCATCAGCCCACCAATTGTGTGGCCCTGCTAACTGGAAGTTTGGTCATGATGAATCAA
GGATACCTGCAAGAGGCCTATTTTTGGACAAAGCAAGTTCTGACAATCATGGAGAAGTCTATAGTTCTATTAAATGATGT
GACAGATGGCTCTCTCTATGAGGGAGTGGCTTACGGCAGCTACACCACCCGATCCCTTTTTCAGTACATGTTTCTTGTTC
AGAGACACTTCGACATTAATCACTTCGGCCATCCTTGGCTAAAAGAGCACTTTGCATTCATGTACAGAACCGTACTTCCA
GGCTTTCAGAGAACTGTGGCTATAGCAGATTCCAATTATAATTGGTTCTATGGACCTGAGAGCCAGCTGGTGTTTTTAGA
CAAATATGTCTTGAGAAATGGAAGTGGTAATTGGCTGGCTGAACAGATTCATGCAAACCGAGTGCAAGAAGGTCCTGGAA
CACCAGCTAAAGGACAGCGCTGGTGCACCCTTCATACTGAGTTTCTTTGGTATGATGCAACTTTACAGTCTACTCCTCCA
CCTGATTTCGGCACACCTCAGCTGCACTACTTTGAAGACTGGGGTGTAGTGACTTATGGAAGTTCCCTACCTGCGGAAAT
TAACAGACCTTTTCTTTCCTTTAAATCAGGAAAGCTTGGAGGCCGTGCTATATTTGACATTGTTCACAAAAATAAGTACA
AAGACTGGATTAAAGGATGGAGAAATTTTAATGCTGGACACGAGCATCCAGATCAAAACTCTTTTACATTTGCTCCTAAT
GGATTTCCCTTTATAACTGAAGCTTTATATGGACCAAAATATACTTTCTTAAATAATGCTTTAATGTTCTCGCCTTCTGT
GTCCGAGAGCTGCTTTGCTCCATGGCAAGGTCAGGTAACAGAAGACTGTACTTCTAAATGGCTAAAATACAAACAAGGGG
AAGCTGCAGACTCTCAAGGAAGGGTGGTAGCTGCTGTGGAAAAATCTGGGGTTGTTTTTATCAGGGGTGAAGGGGTTGGA
GCCTACAGTCCTAACTTGAAATTGAAAAGTGTTCAAAGAAATCTTATCCTGCTACATCCACAGTTGTTACTTCTTGTAGA
CCATATTCACTTAGACCGTGGCAGCACTCTGGAAGCAACTTCCAGCTTTTTCCACAATGTGGATATGCCTTTTGAGGCAA
CCTCCATTGATAGTGTCCATGGAGCAATAATTAGGCACAGAGATGGAATGTATAAGATGTACTGGATGGATGACACTGGT
CAGAGTGAGAAAGCAGTCATTGCTTCAACTTCTTACCCACAGGGTTATCCATACAATGGAACTAATTATGTGAATGTCAC
AACATACCTCAGGAAACCTATCACAAGAGCCATATATGTTTTTATAGGACCTTCTGTGGACGTTGAGAGCTTTAGTGTCC
ATGGAGATTATCAGCAAGTTGATGTGTATCTTGCTACCAGTGAACATGCATATGCTGCTTACATTTTCACAGGAGAAACA
CCTAGCCAGTCCATCTATGCTAAAGTCGTTGCAGATAGACAGAAATTTGTCTTTGACAAGACCTCCTCCATCGGGAGCTC
TTCTCCAGAGGAAGTTAAAGATTATTCTGCGATTGTAGAGCAGAATCTCCAGCACTTTAAGCCGGTTTTTCAGGAAATGG
AGAAGCAAATTCTGTCTCATGTTAAAAACACGGCCAGCTTTAGAAAGACGGCTGAACGTCTGCTTAGGTTTTCAGATAAA
AGAAACACGGAGGAGGCTATTGAAAAAATATTTTCAGTATCTCAGCAACAGAAGCAGCAAGGCAAAACCAAAAAAATCAG
GAAGGCCACAAGAAATGACAAATTTATAAATGCTGTACCAGATTTATTTGCACAAATAGAAGTCAATGAGAAGCAGACGC
GCCAAAAAGCTATGGCTCTGGCACAGAGTGAACTTCCAGTCAATGAAGAAGAAGAAATGAAAGACCTTTTGGACTTTGTA
GATAAACCTCAAGTCAAGCAAAAATCTGTTTCTGTTAGCAAACATGTATCCCCTCACATGTTAACGACTTTCCACAGCGG
GACTTCTATTTCGGACTCCTACACCAGACTGTTTTTAATTCTAAACATTTCCATCTTCATGGTCCTGTTAGTGCTACAGC
TATCTCGGTTCCTGAAGCCAAAGGGTATGCAACAGAAAAGATGTCTGTATGCTATACTCACATTGGATTTTTGTATATTG
ATGTGGCTGTATTTATCATGTTATCAGTCTCAATGTTAG
TGTATCAAAGATGGTCTGGCAGAGCTGGTGGCCTGGAGATCTAATGTCACAATGAGGACTCACACTCGGGGAGCCCCCAG
TGTATTTTTCATACATTTGCTTTGTTACATTGTGGTTTACTGCACAGAAAAGGACATAAATACACAAATACCATTCCTTA
ATGCAAAATATGATGGCTATCCCATGCTATACTTCTCCAAGGGTGAGATGGAAACACTTCGAGCCCAGGCAGCGAGCAGC
CATCAGCACATTTCTGCAAGAATTAATGAGGCAGTTCATGTAATGCTGACCAACCCTAGTGAGTACCTTCCCCCATGGGA
TCCAAAGGAGTTTTCTGCTCGATGGAATGAAATTTACGGCAACAACCTTGGTGCGCTGGCAATGTACTGCGTTTTGAATC
CAGATAACACTGAAGCACTTGGCCTGGCCAGAGAATATATGGAAAGGATGGCAGCTCAGCCTAGTTGGTTAGTGAAAGAT
GCTCCATGGGATGAAGTTCCCTTGGCACACTCTCTGGTTGGCTTTGCTACAGCTTATGACTTTCTTTACAACTCCTTTAG
CAAGCAACAGAAGGTGAGGTTTCTAGAGGTAATCGCCAACGCCTCCGTAAATATGTATGAAACCTCATTCAGGAGAGGAT
GGGGCTTTCAGTACATTCACAACCATCAGCCCACCAATTGTGTGGCCCTGCTAACTGGAAGTTTGGTCATGATGAATCAA
GGATACCTGCAAGAGGCCTATTTTTGGACAAAGCAAGTTCTGACAATCATGGAGAAGTCTATAGTTCTATTAAATGATGT
GACAGATGGCTCTCTCTATGAGGGAGTGGCTTACGGCAGCTACACCACCCGATCCCTTTTTCAGTACATGTTTCTTGTTC
AGAGACACTTCGACATTAATCACTTCGGCCATCCTTGGCTAAAAGAGCACTTTGCATTCATGTACAGAACCGTACTTCCA
GGCTTTCAGAGAACTGTGGCTATAGCAGATTCCAATTATAATTGGTTCTATGGACCTGAGAGCCAGCTGGTGTTTTTAGA
CAAATATGTCTTGAGAAATGGAAGTGGTAATTGGCTGGCTGAACAGATTCATGCAAACCGAGTGCAAGAAGGTCCTGGAA
CACCAGCTAAAGGACAGCGCTGGTGCACCCTTCATACTGAGTTTCTTTGGTATGATGCAACTTTACAGTCTACTCCTCCA
CCTGATTTCGGCACACCTCAGCTGCACTACTTTGAAGACTGGGGTGTAGTGACTTATGGAAGTTCCCTACCTGCGGAAAT
TAACAGACCTTTTCTTTCCTTTAAATCAGGAAAGCTTGGAGGCCGTGCTATATTTGACATTGTTCACAAAAATAAGTACA
AAGACTGGATTAAAGGATGGAGAAATTTTAATGCTGGACACGAGCATCCAGATCAAAACTCTTTTACATTTGCTCCTAAT
GGATTTCCCTTTATAACTGAAGCTTTATATGGACCAAAATATACTTTCTTAAATAATGCTTTAATGTTCTCGCCTTCTGT
GTCCGAGAGCTGCTTTGCTCCATGGCAAGGTCAGGTAACAGAAGACTGTACTTCTAAATGGCTAAAATACAAACAAGGGG
AAGCTGCAGACTCTCAAGGAAGGGTGGTAGCTGCTGTGGAAAAATCTGGGGTTGTTTTTATCAGGGGTGAAGGGGTTGGA
GCCTACAGTCCTAACTTGAAATTGAAAAGTGTTCAAAGAAATCTTATCCTGCTACATCCACAGTTGTTACTTCTTGTAGA
CCATATTCACTTAGACCGTGGCAGCACTCTGGAAGCAACTTCCAGCTTTTTCCACAATGTGGATATGCCTTTTGAGGCAA
CCTCCATTGATAGTGTCCATGGAGCAATAATTAGGCACAGAGATGGAATGTATAAGATGTACTGGATGGATGACACTGGT
CAGAGTGAGAAAGCAGTCATTGCTTCAACTTCTTACCCACAGGGTTATCCATACAATGGAACTAATTATGTGAATGTCAC
AACATACCTCAGGAAACCTATCACAAGAGCCATATATGTTTTTATAGGACCTTCTGTGGACGTTGAGAGCTTTAGTGTCC
ATGGAGATTATCAGCAAGTTGATGTGTATCTTGCTACCAGTGAACATGCATATGCTGCTTACATTTTCACAGGAGAAACA
CCTAGCCAGTCCATCTATGCTAAAGTCGTTGCAGATAGACAGAAATTTGTCTTTGACAAGACCTCCTCCATCGGGAGCTC
TTCTCCAGAGGAAGTTAAAGATTATTCTGCGATTGTAGAGCAGAATCTCCAGCACTTTAAGCCGGTTTTTCAGGAAATGG
AGAAGCAAATTCTGTCTCATGTTAAAAACACGGCCAGCTTTAGAAAGACGGCTGAACGTCTGCTTAGGTTTTCAGATAAA
AGAAACACGGAGGAGGCTATTGAAAAAATATTTTCAGTATCTCAGCAACAGAAGCAGCAAGGCAAAACCAAAAAAATCAG
GAAGGCCACAAGAAATGACAAATTTATAAATGCTGTACCAGATTTATTTGCACAAATAGAAGTCAATGAGAAGCAGACGC
GCCAAAAAGCTATGGCTCTGGCACAGAGTGAACTTCCAGTCAATGAAGAAGAAGAAATGAAAGACCTTTTGGACTTTGTA
GATAAACCTCAAGTCAAGCAAAAATCTGTTTCTGTTAGCAAACATGTATCCCCTCACATGTTAACGACTTTCCACAGCGG
GACTTCTATTTCGGACTCCTACACCAGACTGTTTTTAATTCTAAACATTTCCATCTTCATGGTCCTGTTAGTGCTACAGC
TATCTCGGTTCCTGAAGCCAAAGGGTATGCAACAGAAAAGATGTCTGTATGCTATACTCACATTGGATTTTTGTATATTG
ATGTGGCTGTATTTATCATGTTATCAGTCTCAATGTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 3 .74 RPM |
| SRP007412_skeletal_muscle | 2 .28 RPM |
| SRP007412_heart | 6 .84 RPM |
| SRP007412_kidney | 6 .84 RPM |
| SRP007412_liver | 8 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000013791 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000004530 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000111817 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026746 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013106 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016948 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000018529 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000010799 | ortholog_one2one | 1 retrogene | |
| Takifugu rubripes | ENSTRUG00000006239 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xtro_8 | 52.19 | 65.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXETG00000032776 retrocopies