Parental gene: | ivd, ENSXETG00000016078 |
| Aliases: | None |
| Description: | isovaleryl-CoA dehydrogenase [Source:Jamboree;Acc:XB-GENE-1008677] |
| Organism: | Xenopus (Xenopus tropicalis) |
| Coordinates: | GL173263.1:399141..411736(-) |
>ENSXETG00000016078
CTCGGCCTCCTTGGTTGGTTCCTGGAAATCATGGCTGCTCTCCTTCGTAAAGCGGTCGGTGTGAGCCGCCTTAGCCTGCC
GGTGTTGTCTCAGTGGAGCAGAAGGTGCTCGGGAATATCGGTGGATGACACTGTCAATGGGCTGAATGATGAGCAGAAAC
AGCTCCGGCAGACCCTGCACAGGTTTTGCCAGGATCACCTCAACCCCGTTGCCAATGAGATTGATCAGAAGAATAACTTT
GCGGAGATGAGGAGCTTTTGGAAGAAGCTTGGAGAACTTGGGGTTCTTGGAATTACTGCTCCAGTTGAGTATGGTGGATC
TGCTATGGGCTACCTGGAGCATGTTCTAGTAGTGGAGGAAATATCCCGGGCCTCAGCAGCCGTTGGGCTGAGTTATGGGG
CGCACTCCAACCTCTGTATCAACCAGATAGTCCGCAATGGAAACGAGGCCCAGAAAGAGAAGTATCTTCCCAAGCTGATC
AGTGGGGAGTACATTGGAGCCCTGGCTATGAGCGAGCCAAACTCCGGGTCTGACGTGGTGTCCATGAGATTGAAGGCAGA
GAAGAAAGGTGATTATTACGTCCTGAATGGCAATAAATTCTGGATTACCAATGGGCCCGATGCTGATGTGCTGGTGGTTT
ATGCAAAGACAGACCCTTCAGCTCAACCCGCCTCTCATGGTATCACTGCTTTCCTGGTGGAGAAGGGGATGCCAGGGTTC
AGCACCGCACAAAAACTGGATAAGCTGGGGATGAGGGGCTCTAACACCTGTGAGCTTGTGTTTGAGGACTGCAAGATTCC
TGAGCAGAATGTATTAGGCCACTTGGGAAAAGGAGTGTATGTGCTGATGAGTGGTTTGGACTTGGAGAGGCTGGTCTTGT
CTGGGGGCCCATTGGGCATCATGCAGGCTGTGTTAGACCATGCAATTCCCTATCTGCACACCAGAGAGGCCTTTGGGCAG
AAAATTGGCCATTTCCAGCTTATGCAAGGGAAAATGGCCGACATGTACACCCGCCTGGCAGCTTGTCGGCAGTATGTTTA
TAATGTGGCAAAGGCCTGCGACCAGGGACATTTCAATTCAAAGGACTGTGCCGGGGTGATCCTGTACTCAGCAGAGTGTG
CCACACAGGTGGCTCTGGATGGCATCCAATGTCTGGGGGGCAATGGGTACATCAACGATTATCCCATGGGCCGCTTCCTT
CGTGATGCTAAGCTGTATGAGATTGGGGCAGGCACCAGTGAAGTTCGGAGAATGCTCATAGGCAGGGCCTTCAACGCTCT
GTACAAATAA
CTCGGCCTCCTTGGTTGGTTCCTGGAAATCATGGCTGCTCTCCTTCGTAAAGCGGTCGGTGTGAGCCGCCTTAGCCTGCC
GGTGTTGTCTCAGTGGAGCAGAAGGTGCTCGGGAATATCGGTGGATGACACTGTCAATGGGCTGAATGATGAGCAGAAAC
AGCTCCGGCAGACCCTGCACAGGTTTTGCCAGGATCACCTCAACCCCGTTGCCAATGAGATTGATCAGAAGAATAACTTT
GCGGAGATGAGGAGCTTTTGGAAGAAGCTTGGAGAACTTGGGGTTCTTGGAATTACTGCTCCAGTTGAGTATGGTGGATC
TGCTATGGGCTACCTGGAGCATGTTCTAGTAGTGGAGGAAATATCCCGGGCCTCAGCAGCCGTTGGGCTGAGTTATGGGG
CGCACTCCAACCTCTGTATCAACCAGATAGTCCGCAATGGAAACGAGGCCCAGAAAGAGAAGTATCTTCCCAAGCTGATC
AGTGGGGAGTACATTGGAGCCCTGGCTATGAGCGAGCCAAACTCCGGGTCTGACGTGGTGTCCATGAGATTGAAGGCAGA
GAAGAAAGGTGATTATTACGTCCTGAATGGCAATAAATTCTGGATTACCAATGGGCCCGATGCTGATGTGCTGGTGGTTT
ATGCAAAGACAGACCCTTCAGCTCAACCCGCCTCTCATGGTATCACTGCTTTCCTGGTGGAGAAGGGGATGCCAGGGTTC
AGCACCGCACAAAAACTGGATAAGCTGGGGATGAGGGGCTCTAACACCTGTGAGCTTGTGTTTGAGGACTGCAAGATTCC
TGAGCAGAATGTATTAGGCCACTTGGGAAAAGGAGTGTATGTGCTGATGAGTGGTTTGGACTTGGAGAGGCTGGTCTTGT
CTGGGGGCCCATTGGGCATCATGCAGGCTGTGTTAGACCATGCAATTCCCTATCTGCACACCAGAGAGGCCTTTGGGCAG
AAAATTGGCCATTTCCAGCTTATGCAAGGGAAAATGGCCGACATGTACACCCGCCTGGCAGCTTGTCGGCAGTATGTTTA
TAATGTGGCAAAGGCCTGCGACCAGGGACATTTCAATTCAAAGGACTGTGCCGGGGTGATCCTGTACTCAGCAGAGTGTG
CCACACAGGTGGCTCTGGATGGCATCCAATGTCTGGGGGGCAATGGGTACATCAACGATTATCCCATGGGCCGCTTCCTT
CGTGATGCTAAGCTGTATGAGATTGGGGCAGGCACCAGTGAAGTTCGGAGAATGCTCATAGGCAGGGCCTTCAACGCTCT
GTACAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 59 .54 RPM |
| SRP007412_skeletal_muscle | 58 .50 RPM |
| SRP007412_heart | 139 .25 RPM |
| SRP007412_kidney | 139 .25 RPM |
| SRP007412_liver | 46 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000014462 | ortholog_one2one | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000001085 | other_paralog | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000007932 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xtro_43 | 64.33 | 69.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXETG00000016078 retrocopies