Parental gene:

RPS6, ENSTSYG00000008569

Aliases:None
Description:ribosomal protein S6 [Source:HGNC Symbol;Acc:10429]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_3844:83974..89146(-)


>ENSTSYG00000008569
ATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTACGTGGTCCGAATCAGTG
GCGGGAACGATAAACAAGGTTTCCCCATGAAGCAGGGTGTCTTGACCCATGGCCGTGTCCGCCTGCTGCTGAGTAAGGGG
CATTCCTGTTATAGACCAAGGAGAACTGGAGAAAGAAAGCGCAAATCTGTCCGGGGTTGCATTGTGGATGCCAATCTGAG
CGTTCTCAACTTGGTTATTGTAAAAAAAGGAGAGAAGGATATTCCTGGACTGACTGACACCACGGTGCCTCGTCGACTGG
GGCCCAAAAGGGCTAGCAGGATCCGCAAACTCTTCAATCTCTCTAAAGAAGATGATGTCCGCCAGTATGTTGTAAGAAAG
CCCCTAAACAAAGAAGGTAAGAAACCTAGGACCAAAGCACCCAAGATTCAGCGACTTGTCACTCCGCGTGTCCTGCAACA
CAAACGCCGGCGTATTGCTCTGAAGAAACAGCGTACTAAGAAAAATAAGGAAGAGGCTGCAGAATATGCTAAACTTTTGG
CCAAGAGAATGAAGGAGGCCAAAGAAAAACGCCAGGAGCAGATTGCCAAGAGGCGCAGGCTGTCCTCTCTGCGAGCTTCT
ACTTCCAAGTCTGAGTCTAGTCAAAAATGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000017634 possible_ortholog 1 retrogene
retro_acar_20,
Cavia porcellus ENSCPOG00000003750 possible_ortholog 4 retrogenes
retro_cpor_1244, retro_cpor_22, retro_cpor_317, retro_cpor_486,
Echinops telfairi ENSETEG00000001584 ortholog_one2one 18 retrogenes
retro_etel_1143, retro_etel_1281, retro_etel_1410, retro_etel_1430, retro_etel_1575, retro_etel_167, retro_etel_1822, retro_etel_188, retro_etel_1964, retro_etel_2004, retro_etel_2041, retro_etel_2194, retro_etel_263, retro_etel_337, retro_etel_378, retro_etel_541, retro_etel_809, retro_etel_825,
Ficedula albicollis ENSFALG00000003078 possible_ortholog 1 retrogene
retro_falb_24,
Loxodonta africana ENSLAFG00000010766 possible_ortholog 4 retrogenes
retro_lafr_1021, retro_lafr_1239, retro_lafr_59, retro_lafr_667,
Myotis lucifugus ENSMLUG00000007588 possible_ortholog 27 retrogenes
retro_mluc_1041, retro_mluc_1146, retro_mluc_1169, retro_mluc_1393, retro_mluc_1411, retro_mluc_1448, retro_mluc_1472, retro_mluc_1532, retro_mluc_1566, retro_mluc_1593, retro_mluc_1629, retro_mluc_1635, retro_mluc_1723, retro_mluc_1799, retro_mluc_1909, retro_mluc_1928, retro_mluc_1933, retro_mluc_2110, retro_mluc_2129, retro_mluc_490, retro_mluc_493, retro_mluc_514, retro_mluc_557, retro_mluc_652, retro_mluc_678, retro_mluc_722, retro_mluc_830,
Monodelphis domestica ENSMODG00000004095 possible_ortholog 1 retrogene
retro_mdom_301,
Ochotona princeps ENSOPRG00000012290 possible_ortholog 5 retrogenes
retro_opri_123, retro_opri_642, retro_opri_78, retro_opri_862, retro_opri_895,
Sarcophilus harrisii ENSSHAG00000005486 possible_ortholog 1 retrogene
retro_shar_549,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_87 85.93 53.41
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2. retro_tsyr_116 63.16 53.41
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3. retro_tsyr_347 81.58 61.04
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4. retro_tsyr_535 68.78 81.53
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5. retro_tsyr_757 93.18 70.68
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6. retro_tsyr_1048 81.69 57.03
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7. retro_tsyr_1521 65.38 51.81
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8. retro_tsyr_2090 58.74 57.03
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Download FASTA sequences of all ENSTSYG00000008569 retrocopies