Parental gene: | TDP1, ENSTBEG00000002578 |
| Aliases: | None |
| Description: | tyrosyl-DNA phosphodiesterase 1 [Source:HGNC Symbol;Acc:18884] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_2754:232245..330306(+) |
>ENSTBEG00000002578
TCGAGTAGTGATGAAAGTGAGGATGAACCTAAAGCGGACAAGCCATCTACCTCTTCTCTCCCTCACGCTGGGCACGGAGC
GGCAACTGAGCCCGGGTACACCTGCTCTGAGGCTCGGAAAGCCGCACACAGGAGGAAGATGTCCCCGGTGAGGTGCAGCA
ACACAGATTCAGTTTCACCTCTCAAAAGACAGAAAAGTGGCTCCCAGGATGACCTAGGCTGGTGTCTGTCCAGCAGCGAT
GATGAGTCGCCACCAGAAACGCAGCATAAACAGGCTGAGGAAGCGACGGTCAAAGAGGAGAAAGACATCCCTCCTCCCAA
AGATGGTGCTGCCCAAAGAGCTAGAAACCATGGGCCACCCGCCAGCCACAGACTCAAAGAGGAGGAAGAAGATGAATATG
AGACGTCAGGGGAAGGCCAGGATGTTTGGGACATGCTGAGTAAAGGGAACCCCTTCCAGTTTTACCTCACCAGAGTCAAG
GGAATTAAGCCAAAGTACAACTCTGGAGCCCTCCACATCAAGGATATTTTATCTCCTCTATTTGGAACGCTTGTTTCTTC
AGCTCAGTTTAACTACTGCTTTGACGTGGACTGGCTCGTAAAACAGTATCCACCCGAATTCAGGAAGAAACCAATCCTGC
TTGTGCACGGTGATAAGCGAGAAGCTAAGGCTCACTTACACGCCCGGGCGAAGCCTTACGAGAACATTTCCCTCTGCCAG
GCAAAGTTGGATATCGCATTTGGAACACATCACACGAAAATGATGCTGTTGCTCTATGAAGAAGGCCTCCGGGTTGTCAT
ACACACCTCCAATCTCATTCATGAGGACTGGTACCAGAAAACTCAGGGAATATGGTTGAGCCCCTTGTACCCACGGATCG
TCCACGGAACCCCCAGATCTGGAGAATCAACAACACATTTTAAAGCTGACCTCATCAGTTACTTGACGGCTTACAATGCT
CCGTCTCTCAAGGAGTGGATAGACACCATCCACGAGCACGACCTCTCTGAAACAAATGTTTACCTTATTGGTTCAACTCC
AGGACGCTTTCAAGGAAGCCAGAAAGATAACTGGGGACATTTCAGGCTCAGGAAGCTCCTGAGAGAACACGCCTCGTCCA
CACCCAAAACAGAGCCCTGGCCCCTGGTGGGTCAGTTCTCAAGCATTGGCTCCTTGGGGACTGATGAGTCAAAATGGTTA
TGTTCTGAGTTTAAAGAGAGCTTGCTGACACTGGGGAGGGATAGCAAGATTCCTGGAAAAAGCACCGTGCCTCTTCATTT
GATCTATCCTTCTGTGGAGAATGTGCGGACCAGCTTAGAAGGCTATCCTGCTGGGGGTTCTCTTCCCTACAGCATCCAGA
CAGCTGAAAAACAGAATTGGCTGCATTCCTATTTTCACAAATGGTCAGCCGAGACTTCTGGCCGCAGCAGTGCCATGCCA
CATATCAAGACATACATGAGGCCCTCTCCAGACTTCAGTGAAATTGCTTGGTTCCTTGTCACAAGTGCGAATCTGTCCAA
AGCCGCCTGGGGAGCTCTGGAGAAGAATGGCACCCAGCTGATGATCCGCTCCTACGAGCTTGGGGTCCTTTTCCTGCCTT
CAGCATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGGCCATGGATTTGGAACATTCCTTATGTCAAAGCACCAGA
CACACATGGGAACATGTGGGTGCCCTCCTGA
TCGAGTAGTGATGAAAGTGAGGATGAACCTAAAGCGGACAAGCCATCTACCTCTTCTCTCCCTCACGCTGGGCACGGAGC
GGCAACTGAGCCCGGGTACACCTGCTCTGAGGCTCGGAAAGCCGCACACAGGAGGAAGATGTCCCCGGTGAGGTGCAGCA
ACACAGATTCAGTTTCACCTCTCAAAAGACAGAAAAGTGGCTCCCAGGATGACCTAGGCTGGTGTCTGTCCAGCAGCGAT
GATGAGTCGCCACCAGAAACGCAGCATAAACAGGCTGAGGAAGCGACGGTCAAAGAGGAGAAAGACATCCCTCCTCCCAA
AGATGGTGCTGCCCAAAGAGCTAGAAACCATGGGCCACCCGCCAGCCACAGACTCAAAGAGGAGGAAGAAGATGAATATG
AGACGTCAGGGGAAGGCCAGGATGTTTGGGACATGCTGAGTAAAGGGAACCCCTTCCAGTTTTACCTCACCAGAGTCAAG
GGAATTAAGCCAAAGTACAACTCTGGAGCCCTCCACATCAAGGATATTTTATCTCCTCTATTTGGAACGCTTGTTTCTTC
AGCTCAGTTTAACTACTGCTTTGACGTGGACTGGCTCGTAAAACAGTATCCACCCGAATTCAGGAAGAAACCAATCCTGC
TTGTGCACGGTGATAAGCGAGAAGCTAAGGCTCACTTACACGCCCGGGCGAAGCCTTACGAGAACATTTCCCTCTGCCAG
GCAAAGTTGGATATCGCATTTGGAACACATCACACGAAAATGATGCTGTTGCTCTATGAAGAAGGCCTCCGGGTTGTCAT
ACACACCTCCAATCTCATTCATGAGGACTGGTACCAGAAAACTCAGGGAATATGGTTGAGCCCCTTGTACCCACGGATCG
TCCACGGAACCCCCAGATCTGGAGAATCAACAACACATTTTAAAGCTGACCTCATCAGTTACTTGACGGCTTACAATGCT
CCGTCTCTCAAGGAGTGGATAGACACCATCCACGAGCACGACCTCTCTGAAACAAATGTTTACCTTATTGGTTCAACTCC
AGGACGCTTTCAAGGAAGCCAGAAAGATAACTGGGGACATTTCAGGCTCAGGAAGCTCCTGAGAGAACACGCCTCGTCCA
CACCCAAAACAGAGCCCTGGCCCCTGGTGGGTCAGTTCTCAAGCATTGGCTCCTTGGGGACTGATGAGTCAAAATGGTTA
TGTTCTGAGTTTAAAGAGAGCTTGCTGACACTGGGGAGGGATAGCAAGATTCCTGGAAAAAGCACCGTGCCTCTTCATTT
GATCTATCCTTCTGTGGAGAATGTGCGGACCAGCTTAGAAGGCTATCCTGCTGGGGGTTCTCTTCCCTACAGCATCCAGA
CAGCTGAAAAACAGAATTGGCTGCATTCCTATTTTCACAAATGGTCAGCCGAGACTTCTGGCCGCAGCAGTGCCATGCCA
CATATCAAGACATACATGAGGCCCTCTCCAGACTTCAGTGAAATTGCTTGGTTCCTTGTCACAAGTGCGAATCTGTCCAA
AGCCGCCTGGGGAGCTCTGGAGAAGAATGGCACCCAGCTGATGATCCGCTCCTACGAGCTTGGGGTCCTTTTCCTGCCTT
CAGCATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGGCCATGGATTTGGAACATTCCTTATGTCAAAGCACCAGA
CACACATGGGAACATGTGGGTGCCCTCCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001905 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005456 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_1158 | 90.02 | 89.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_4636 | 90.93 | 77.18 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000002578 retrocopies