Parental gene: | CDYL2, ENSTBEG00000000034 |
| Aliases: | None |
| Description: | chromodomain protein, Y-like 2 [Source:HGNC Symbol;Acc:23030] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_4222:60376..134725(-) |
>ENSTBEG00000000034
GTTGAAAGGATTGTAGACAAGAGGAAGAATAAGAAAGGAAAATGGGAGTATCTTATCCGGTGGAAAGGCTATGGGAGCAC
AGAGGACACGTGGGAGCCAGAACACCACCTCTTGCACTGTGAGGAGTTTATCGACGAGTTCAATGGGCTGCACGTGTCCA
AGGACAAGAGGATCAGGCCAGGGAAACAGTCTAACACCTCCAAGCTCCTACGTGACAGCCGGAGCCCAGCGAGTGAAAAA
CTAGCCCATAGACCTTCAGAACCTGGGAAGAGCAAAGGGACTTCCCATAAACGGAAGCGCATCAACCCTCCCCTATCTAA
GCCGAAGAAGGGGTACTCAGGCAAGCCCCCTACAGGGGGCGATCGAGCTGCCAAGACGGTGTCTTACAGGACTACCCCCA
GCGGTTTGCAAATAATGCCCCTGAAAAGGCAGAATGGGATGGAAAATGGGGACGCCTCTGAGAAGGACGAGAGGCACTTT
GGAAACGGGTCTCATCAGCCTGGCTTGGATTTGAACGATCATGTTGGAGAGCAGGATGTGGGTGATTGTGAAGTGAACCA
TGCAGCACTGGCAGAGAACGGGCTCGGCTCTGCTCTGACTAATGGGGGATTGAACCTGCACAGCCCTGTGAAGAGAAAGC
TGGAAACAGAGAAGGACTATGTCTTTGACAAGAGGCTCAGGTACAGCGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGA
GATATTGTCGTGCGGAAAGAAGAAGGGTTCACACACATCTTGCTGTCCAGCCAGACCTCGGATAACAATGCACTGNNNNN
NNNNATCATGAAGGAAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGATGACAGCAAACTGCTGCTCCTCAGCGCAGTGG
GGAGTGTGTTCTGCAGCGGCCTAGATTACTCCTACCTAATTGGCCGGTTGTCCAGCGACCGAAGAAAGGAGAGCACTCGG
ATTGCTGAAGCCATCAGGGACTTTGTGAAGGCCTTTATCCAGTTTAAGAAACCCATTGTGGTGGCCATCAATGGGCCGGC
TCTGGGCCTGGGTGCCTCCATCCTACCCCTCTGTGACATCGTGTGGGCCAGCGAGAAGGCCTGGTTTCAGACGCCCTACG
CCACCATCCGCCTCACACCTGCTGGCTGCTCATCCTACACCTTCCCCCAGATCCTGGGTGTGGCTCTGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTTGGAGGAGTCCAAATGCCTTGTTC
GGAGCTTCCTGAAATCAGTGCTGGAAGATGTCAACGAGAAAGAATGCCTCATGCTCAAGCAACTCTGGAGTTTCTCCAAG
GGCCTGGATTCCCTGTTCAGCTACCTGCAGGACAAAATTTATGAAGTCTGA
GTTGAAAGGATTGTAGACAAGAGGAAGAATAAGAAAGGAAAATGGGAGTATCTTATCCGGTGGAAAGGCTATGGGAGCAC
AGAGGACACGTGGGAGCCAGAACACCACCTCTTGCACTGTGAGGAGTTTATCGACGAGTTCAATGGGCTGCACGTGTCCA
AGGACAAGAGGATCAGGCCAGGGAAACAGTCTAACACCTCCAAGCTCCTACGTGACAGCCGGAGCCCAGCGAGTGAAAAA
CTAGCCCATAGACCTTCAGAACCTGGGAAGAGCAAAGGGACTTCCCATAAACGGAAGCGCATCAACCCTCCCCTATCTAA
GCCGAAGAAGGGGTACTCAGGCAAGCCCCCTACAGGGGGCGATCGAGCTGCCAAGACGGTGTCTTACAGGACTACCCCCA
GCGGTTTGCAAATAATGCCCCTGAAAAGGCAGAATGGGATGGAAAATGGGGACGCCTCTGAGAAGGACGAGAGGCACTTT
GGAAACGGGTCTCATCAGCCTGGCTTGGATTTGAACGATCATGTTGGAGAGCAGGATGTGGGTGATTGTGAAGTGAACCA
TGCAGCACTGGCAGAGAACGGGCTCGGCTCTGCTCTGACTAATGGGGGATTGAACCTGCACAGCCCTGTGAAGAGAAAGC
TGGAAACAGAGAAGGACTATGTCTTTGACAAGAGGCTCAGGTACAGCGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGA
GATATTGTCGTGCGGAAAGAAGAAGGGTTCACACACATCTTGCTGTCCAGCCAGACCTCGGATAACAATGCACTGNNNNN
NNNNATCATGAAGGAAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGATGACAGCAAACTGCTGCTCCTCAGCGCAGTGG
GGAGTGTGTTCTGCAGCGGCCTAGATTACTCCTACCTAATTGGCCGGTTGTCCAGCGACCGAAGAAAGGAGAGCACTCGG
ATTGCTGAAGCCATCAGGGACTTTGTGAAGGCCTTTATCCAGTTTAAGAAACCCATTGTGGTGGCCATCAATGGGCCGGC
TCTGGGCCTGGGTGCCTCCATCCTACCCCTCTGTGACATCGTGTGGGCCAGCGAGAAGGCCTGGTTTCAGACGCCCTACG
CCACCATCCGCCTCACACCTGCTGGCTGCTCATCCTACACCTTCCCCCAGATCCTGGGTGTGGCTCTGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTTGGAGGAGTCCAAATGCCTTGTTC
GGAGCTTCCTGAAATCAGTGCTGGAAGATGTCAACGAGAAAGAATGCCTCATGCTCAAGCAACTCTGGAGTTTCTCCAAG
GGCCTGGATTCCCTGTTCAGCTACCTGCAGGACAAAATTTATGAAGTCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Tupaia belangeri | ENSTBEG00000008062 | other_paralog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000015862 | within_species_paralog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_1040 | 87.69 | 79.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_3676 | 90.23 | 79.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_4160 | 90.46 | 73.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tbel_4448 | 84.46 | 68.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tbel_4710 | 90.91 | 77.02 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000000034 retrocopies