Parental gene: | BLOC1S5, ENSSTOG00000027342 |
| Aliases: | None |
| Description: | biogenesis of lysosomal organelles complex-1, subunit 5, muted [Source:HGNC Symbol;Acc:18561] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393344.1:4567566..4584549(+) |
>ENSSTOG00000027342
GAAAAACGTGGTCTTCGAGAAATGCGAGTTCTTGAAAATTTGAAGAATATGATCCATGAAACAAATGAACATACTCTTCC
CAAATGCAGAGAAACGATGCAGGACAACTTGAAAGAAGTTCTCCAGAGATTGCAAGCAGCTAATGACTCCGTCTGTAGAC
TCCAGCAGAGGGAACAGGAACGAAGAAAGATGTATCATGACCACTTAATAGCTACTGAGAAACAGCATCAACTCCAGTGG
GAGGATTTCATGAAAGAACAACCCCGCCGTCAGGCTGAGGTGGATGAAGAACACAGAAGAGCCATGGAAAGGCTTAAAGA
ACAATATGCTGAGATGGAGAAGGGCCTAGCAAAATTCTCAACTTTTTAA
GAAAAACGTGGTCTTCGAGAAATGCGAGTTCTTGAAAATTTGAAGAATATGATCCATGAAACAAATGAACATACTCTTCC
CAAATGCAGAGAAACGATGCAGGACAACTTGAAAGAAGTTCTCCAGAGATTGCAAGCAGCTAATGACTCCGTCTGTAGAC
TCCAGCAGAGGGAACAGGAACGAAGAAAGATGTATCATGACCACTTAATAGCTACTGAGAAACAGCATCAACTCCAGTGG
GAGGATTTCATGAAAGAACAACCCCGCCGTCAGGCTGAGGTGGATGAAGAACACAGAAGAGCCATGGAAAGGCTTAAAGA
ACAATATGCTGAGATGGAGAAGGGCCTAGCAAAATTCTCAACTTTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017324 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000039732 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000010026 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000025755 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030827 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_179 | 83.33 | 68.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1038 | 73.91 | 73.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_1901 | 84.35 | 94.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000027342 retrocopies