Parental gene: | RNF168, ENSSTOG00000021829 |
| Aliases: | None |
| Description: | ring finger protein 168, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:26661] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393594.1:1070235..1093886(-) |
>ENSSTOG00000021829
ATGGCTCTACCCAAGGACGCCATCCCTTCCTTGTCGGAATGCCAGTGCCAGATCTGTGTGGAAATCCTAATCGAGCCCGT
AACCCTCCCATGTAACCACACGCTCTGTAATCCGTGCTTCCAGTCGACTGTCGAAAAGGCAAATTTGTGCTGTCCCTTCT
GTCGCCGCCGGGTCTCTTCGTGGACTCGGTATCATACCCGTAAAAATTCTCTCATCAATATGGAACTATGGGAAACGATT
CAAAAACACTATCCAAAGGAGTGCAAGCTTAGAATCTCTGGGCAAGGATCAGAGGAAATTGTTGATGACTACCAGCCCAT
TCGTCTGTTAAGTGAACCTGGGGAATTAAGAAGAGAGTATGAAGAAGAGATAAGCAAGGTGGAGGCAGAGCGACGAGCCA
GTGAGGAAGAAGAAAACAAAGCCAGTGAAGAATATATACAGAGATTATTGGCAGAGGAGGAAGAAGAGGAAAAAAAGCAG
GCAGAGAAAAGGCGAAGTGAAGTGGAAGAACAACTAAAAAATGATGAAGAACTGGCAAGAAAGCTAAGCATTAACATTAA
TAATTTCTGCGAGGGGAGTACCTTGGCTTCTCCTTTGAATTCCAGAAAATCTGATCCAGTCACAACCAAGTCACAAAAGA
AAAATAAGAACAAACAAAGAAACATTGGAAATATTCAGAAGTATTTGTCACCTAAATCTCTATTTGGATCAGCAACACAG
TCTGAAGTTGTACAAGAAGTCAGGAGAAACTCCACAACTAAGGAAATTGACAGAAGTCATATGAAGAGCCCTACAGGGCA
AGATACAGAAATTGAAGAAGATATGCCAACACTTTCTCCTCAAATGTGCCTTGAAATTCAAGAGCAAGGTACAAAGTCTT
CAGTAGAGTCACCTATGCCATGGTTATGTGTCTATGATGCAGAACAGTGCCTTGAAGGAAAAGCCAAAAGATCAAACAAT
CATGATCAAGAGTTATATGTCTTACAGTATGAAGGACCTAAAACCAAAGTTCCCTACTCTAAAGAAGCTACAGTTAAGCC
TTGTGGCAAGACAGAGAATGGGCGTACTTCATCAAATATGATACAAATAATTGGAGACAACCCAGTTGAGATAGAGTCTA
GCCAACCAGACAGTAAAGGTGTTTCAAAAAGAAAAAGCCAGGAATCTTCAGTTGAAGCAGTCAGAGATTCATGCTTTTCT
TTAAAAAGGAAGAAAAAGTTCTCAGAATCTTCTTCAGATCAAGAGGAAACAGAAATGAATTTTACCCAAAAACTGATAGA
TTTGGAGCATTTACTTTTTGAGAGACACAAACAAGAAGAACAAGACCGGCTATTAGCGTTACAACTGCAGAAAGAGGTGG
ATAAAGAACTAATGAAGCCAAACCGGCAAAAAGGATCCCCAGATGGGTACCAGTTACGTACTACATCCTCACCTCCACAT
AACTTACTAAATGGGCAGAAGAATTACAAAGAGAGAAACTTCAAAAAGCAGACTGATGTAGAGCATCCAAAACCTCGAAG
AGGCTCAAGAGATGAAAACTGGCAACCTTCTTTTAAAATCCAGTTGAACAGTTCGGCGAATGGAAAAAAGATGTCAAATT
CTACTAAAGAAAATTGTAATGTATCTAAAAGTACTCATTCTCTACAGCCTAGTAATTCACAGAAAAGTATTTTTCAGATG
TTTTAG
ATGGCTCTACCCAAGGACGCCATCCCTTCCTTGTCGGAATGCCAGTGCCAGATCTGTGTGGAAATCCTAATCGAGCCCGT
AACCCTCCCATGTAACCACACGCTCTGTAATCCGTGCTTCCAGTCGACTGTCGAAAAGGCAAATTTGTGCTGTCCCTTCT
GTCGCCGCCGGGTCTCTTCGTGGACTCGGTATCATACCCGTAAAAATTCTCTCATCAATATGGAACTATGGGAAACGATT
CAAAAACACTATCCAAAGGAGTGCAAGCTTAGAATCTCTGGGCAAGGATCAGAGGAAATTGTTGATGACTACCAGCCCAT
TCGTCTGTTAAGTGAACCTGGGGAATTAAGAAGAGAGTATGAAGAAGAGATAAGCAAGGTGGAGGCAGAGCGACGAGCCA
GTGAGGAAGAAGAAAACAAAGCCAGTGAAGAATATATACAGAGATTATTGGCAGAGGAGGAAGAAGAGGAAAAAAAGCAG
GCAGAGAAAAGGCGAAGTGAAGTGGAAGAACAACTAAAAAATGATGAAGAACTGGCAAGAAAGCTAAGCATTAACATTAA
TAATTTCTGCGAGGGGAGTACCTTGGCTTCTCCTTTGAATTCCAGAAAATCTGATCCAGTCACAACCAAGTCACAAAAGA
AAAATAAGAACAAACAAAGAAACATTGGAAATATTCAGAAGTATTTGTCACCTAAATCTCTATTTGGATCAGCAACACAG
TCTGAAGTTGTACAAGAAGTCAGGAGAAACTCCACAACTAAGGAAATTGACAGAAGTCATATGAAGAGCCCTACAGGGCA
AGATACAGAAATTGAAGAAGATATGCCAACACTTTCTCCTCAAATGTGCCTTGAAATTCAAGAGCAAGGTACAAAGTCTT
CAGTAGAGTCACCTATGCCATGGTTATGTGTCTATGATGCAGAACAGTGCCTTGAAGGAAAAGCCAAAAGATCAAACAAT
CATGATCAAGAGTTATATGTCTTACAGTATGAAGGACCTAAAACCAAAGTTCCCTACTCTAAAGAAGCTACAGTTAAGCC
TTGTGGCAAGACAGAGAATGGGCGTACTTCATCAAATATGATACAAATAATTGGAGACAACCCAGTTGAGATAGAGTCTA
GCCAACCAGACAGTAAAGGTGTTTCAAAAAGAAAAAGCCAGGAATCTTCAGTTGAAGCAGTCAGAGATTCATGCTTTTCT
TTAAAAAGGAAGAAAAAGTTCTCAGAATCTTCTTCAGATCAAGAGGAAACAGAAATGAATTTTACCCAAAAACTGATAGA
TTTGGAGCATTTACTTTTTGAGAGACACAAACAAGAAGAACAAGACCGGCTATTAGCGTTACAACTGCAGAAAGAGGTGG
ATAAAGAACTAATGAAGCCAAACCGGCAAAAAGGATCCCCAGATGGGTACCAGTTACGTACTACATCCTCACCTCCACAT
AACTTACTAAATGGGCAGAAGAATTACAAAGAGAGAAACTTCAAAAAGCAGACTGATGTAGAGCATCCAAAACCTCGAAG
AGGCTCAAGAGATGAAAACTGGCAACCTTCTTTTAAAATCCAGTTGAACAGTTCGGCGAATGGAAAAAAGATGTCAAATT
CTACTAAAGAAAATTGTAATGTATCTAAAAGTACTCATTCTCTACAGCCTAGTAATTCACAGAAAAGTATTTTTCAGATG
TTTTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013317 | ortholog_many2many | 1 retrogene | |
| Felis catus | ENSFCAG00000022131 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000010864 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012066 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_683 | 95.24 | 55.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000021829 retrocopies