Parental gene: | KRT19, ENSSTOG00000014403 |
| Aliases: | None |
| Description: | keratin 19 [Source:HGNC Symbol;Acc:6436] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393300.1:16440731..16444545(-) |
>ENSSTOG00000014403
ATGACTTCCTACAGCTATCGCCAGTCCTCAGCCACCTCGTCTTTCGGGAGCTTTGGCGGCGGCTCCGTGCGTTTTGGGTC
TGGGGGAGCCTTCCGCGCGCCCAGCATCCACGGGGGCTCAGGTGGCCGTGGCATATCCGTGTCCTCTGCCCGCTTCGTGT
CCTCGTCCTCCGCCGGGGGCTATGGTGGCGGCTATGGTGGCGTCCTGGCCGGGTCCGACGGGTTGTTGGCGGGCAACGAG
AAGGTGACCATGCAGAACCTCAACGACCGCCTGGCCTCCTACCTGGACAAGGTGCGCGCCCTGGAGCAGGCCAACGGCGA
GCTGGAGGTGAAGATCCGCGACTGGTACCAGAAGCAGGGGCCCGGGCCCTCCCGCGACTACAGCCACTACTTCAAGACCA
TTGAAGATCTGCGGGACAAGATTCTCGGTGCCACCATTGAGAACTCCAAGATTGTCCTGCAGATTGACAATGCTCGTCTG
GCTGCAGATGACTTCCGAACCAAGTTTGAGACGGAGCAGGCCCTGCGCCTGAGTGTGGAGGCCGACATCAACGGCCTGCG
CAGGGTGCTGGATGAGCTGACCCTGGCCAGGACCGACCTGGAGATGCAGATTGAGGGCCTGAAGGAGGAACTGGCCTACC
TCAAGAAGAACCACGAGGAGGAAATCAGTGCCCTGAGGGGCCAGGTGGGTGGCCAGGTCAACGTAGAGGTGGATTCCACT
CCAGGCATCGACCTAGCCAAGATCCTGAATGACATGAGGAGCCAATATGAGGTCATGGCTGAGAAGAACCGGAAAGACGC
TGAAGCCTGGTTCACAAGTCGGACTGAGGAGCTGAACCGGGAGGTTGCTGGCCACTCGGAACAGCTCAAGATGAGTGAGA
GTGAGGTCACGGACCTGCGACGTACCCTCCAGGGTCTCGAGATTGAGCTACAGTCACAGCTCAGCATGAAAGCCGCCCTG
GAAGGCACACTGGCAGAGACCGAGGCCCGCTACGGAGCCCGGCTGGCGCAGATCCAGGCGAGGATCAGCAGCATCGAAGC
CCAGCTGGGTGACGTGCGGGCTGACACCGAGCGACAGAACCTGGAGTATCAGCAGCTCATGGATATCAAGTCTCGGCTGG
AGCAAGAGATCGCCACCTACCGCAGCCTGCTCGAGGGCCAGGACGCCCACTACAACAATCTGCCCAACGTCTGA
ATGACTTCCTACAGCTATCGCCAGTCCTCAGCCACCTCGTCTTTCGGGAGCTTTGGCGGCGGCTCCGTGCGTTTTGGGTC
TGGGGGAGCCTTCCGCGCGCCCAGCATCCACGGGGGCTCAGGTGGCCGTGGCATATCCGTGTCCTCTGCCCGCTTCGTGT
CCTCGTCCTCCGCCGGGGGCTATGGTGGCGGCTATGGTGGCGTCCTGGCCGGGTCCGACGGGTTGTTGGCGGGCAACGAG
AAGGTGACCATGCAGAACCTCAACGACCGCCTGGCCTCCTACCTGGACAAGGTGCGCGCCCTGGAGCAGGCCAACGGCGA
GCTGGAGGTGAAGATCCGCGACTGGTACCAGAAGCAGGGGCCCGGGCCCTCCCGCGACTACAGCCACTACTTCAAGACCA
TTGAAGATCTGCGGGACAAGATTCTCGGTGCCACCATTGAGAACTCCAAGATTGTCCTGCAGATTGACAATGCTCGTCTG
GCTGCAGATGACTTCCGAACCAAGTTTGAGACGGAGCAGGCCCTGCGCCTGAGTGTGGAGGCCGACATCAACGGCCTGCG
CAGGGTGCTGGATGAGCTGACCCTGGCCAGGACCGACCTGGAGATGCAGATTGAGGGCCTGAAGGAGGAACTGGCCTACC
TCAAGAAGAACCACGAGGAGGAAATCAGTGCCCTGAGGGGCCAGGTGGGTGGCCAGGTCAACGTAGAGGTGGATTCCACT
CCAGGCATCGACCTAGCCAAGATCCTGAATGACATGAGGAGCCAATATGAGGTCATGGCTGAGAAGAACCGGAAAGACGC
TGAAGCCTGGTTCACAAGTCGGACTGAGGAGCTGAACCGGGAGGTTGCTGGCCACTCGGAACAGCTCAAGATGAGTGAGA
GTGAGGTCACGGACCTGCGACGTACCCTCCAGGGTCTCGAGATTGAGCTACAGTCACAGCTCAGCATGAAAGCCGCCCTG
GAAGGCACACTGGCAGAGACCGAGGCCCGCTACGGAGCCCGGCTGGCGCAGATCCAGGCGAGGATCAGCAGCATCGAAGC
CCAGCTGGGTGACGTGCGGGCTGACACCGAGCGACAGAACCTGGAGTATCAGCAGCTCATGGATATCAAGTCTCGGCTGG
AGCAAGAGATCGCCACCTACCGCAGCCTGCTCGAGGGCCAGGACGCCCACTACAACAATCTGCCCAACGTCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000029756 | ortholog_one2one | 9 retrogenes | |
| Equus caballus | ENSECAG00000014086 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000007881 | ortholog_one2many | 6 retrogenes | |
| Homo sapiens | ENSG00000171345 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016901 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000016158 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000018653 | ortholog_one2many | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010787 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000016132 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000024306 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000007908 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000008416 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000009168 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_697 | 51.64 | 68.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1514 | 58.60 | 52.14 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000014403 retrocopies