Parental gene: | LRRC28, ENSSTOG00000004380 |
| Aliases: | None |
| Description: | leucine rich repeat containing 28 [Source:HGNC Symbol;Acc:28355] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393293.1:4132095..4260069(-) |
>ENSSTOG00000004380
ATGGCATCCGAACTTTGTAAGACGATCACTGTGGCAAGGCTTGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCT
GCACCATTTTCCATTGGAGTTACTGAAAGATGAAGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTTA
CCACCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGTACCTTCACTCAAATAACATAGTAGTGGTT
CCAGAAGCTATTGGGTCCCTTGTAAAACTCCAGTATCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAAT
TGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAATCAACTGCAATTCCTACCTCCAGAGGTTGGCGATTTGA
AGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGCGGCTTCATCTGTGCCTTTCTCTGCAG
TACCTCACTGTGGACCGCAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAACGAACTCTCCAT
GGCTGGAAATCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTGCAATACGTATATGTGGATAACAACA
TTCACCTGAAGGGCTTGCCATCTTACCTGTACAATAAAGTCATCGGGTGCAGTGGCTGCGGAGCCCCCATCCAAGTGTCT
GAGGTAAAGCTGCTCTCCTTTTCATCGGGGCAGCTGACTGTCTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACAGAGAA
CGATCACATCCTGCCTCTGCAAGAGCTGGCCATGAGAAGTCTGTATCATGCCTACCACAGATTTCTAAAAGATCTGAACT
TTTTGTCTCCAATCTCATTACCCAGAAGTCTCCTGGAGCTGCTGCACTGCCCCCTGGGGCACTGTCACCGGTGTAGTGAG
CCCATGTTTACCATCGTCTACCCCAAGCTTTTTCCCTTGAGAGAGACGCCGATGGCAGGGCTGCACCAGGGGAGGACAAC
TGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGA
ATGGCATCCGAACTTTGTAAGACGATCACTGTGGCAAGGCTTGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCT
GCACCATTTTCCATTGGAGTTACTGAAAGATGAAGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTTA
CCACCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGTACCTTCACTCAAATAACATAGTAGTGGTT
CCAGAAGCTATTGGGTCCCTTGTAAAACTCCAGTATCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAAT
TGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAATCAACTGCAATTCCTACCTCCAGAGGTTGGCGATTTGA
AGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGCGGCTTCATCTGTGCCTTTCTCTGCAG
TACCTCACTGTGGACCGCAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAACGAACTCTCCAT
GGCTGGAAATCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTGCAATACGTATATGTGGATAACAACA
TTCACCTGAAGGGCTTGCCATCTTACCTGTACAATAAAGTCATCGGGTGCAGTGGCTGCGGAGCCCCCATCCAAGTGTCT
GAGGTAAAGCTGCTCTCCTTTTCATCGGGGCAGCTGACTGTCTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACAGAGAA
CGATCACATCCTGCCTCTGCAAGAGCTGGCCATGAGAAGTCTGTATCATGCCTACCACAGATTTCTAAAAGATCTGAACT
TTTTGTCTCCAATCTCATTACCCAGAAGTCTCCTGGAGCTGCTGCACTGCCCCCTGGGGCACTGTCACCGGTGTAGTGAG
CCCATGTTTACCATCGTCTACCCCAAGCTTTTTCCCTTGAGAGAGACGCCGATGGCAGGGCTGCACCAGGGGAGGACAAC
TGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016965 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000006720 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012729 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1866 | 91.94 | 50.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000004380 retrocopies