Parental gene:

MCFD2, ENSSSCG00000021325

Aliases:None
Description:multiple coagulation factor deficiency 2 [Source:HGNC Symbol;Acc:18451]
Organism:Pig (Sus scrofa)
Coordinates:3:99714045..99719396(+)


>ENSSSCG00000021325
TGGAAGGTCTCACGGACTTGCTCAGCATTCTCAAGGTTCCCTGCCTCCCAGGTACTGGTGACCATGAGATCTCTGTGGCT
GCTCTTCCTGTGGGGCCTGCTCTGGACCTTTTGTGCCTCGGGGGCCAGGGCCAAGGAGCCCGGTGCCAGCTTCTCGCATC
CCGGCAGCGTGGGCCTGGATAAGAACACAGTGCACGACCAAGAGCATATCATGGAGCATCTAGAAGGTGTCATCAACAAA
CCAGAGGCGGAGATGTCCCCACAAGAACTGCAGCTCCATTACTTCAAAATGCATGATTATGACGGCAATAATTTGCTCGA
TGGCCTGGAACTCTCCACAGCCATCACTCATGTCCATAAGGAGGAAGGGAATGAGCAGGCACCAATGAGTGAAGATGAAC
TGATCAACCTAATAGATGGTGTCTTGAGAGATGATGACAAGAACAACGACGGATACATCGACTATGCCGAGTTCGCAAAA
TCACTGCAATAG

Library Parental gene expression (RPM)
SRP014902_placenta 53 .36 RPM
SRP014902_testis 48 .94 RPM
SRP018856_adipose 120 .04 RPM
SRP018288_kidney 137 .51 RPM
SRP018288_lung 90 .12 RPM
SRP018288_liver 180 .86 RPM
SRP018288_heart 163 .42 RPM
SRP035408_liver 298 .90 RPM
SRP035408_brain 45 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006097 ortholog_one2one 2 retrogenes
retro_amel_720, retro_amel_906,
Canis familiaris ENSCAFG00000032480 ortholog_one2one 1 retrogene
retro_cfam_797,
Choloepus hoffmanni ENSCHOG00000003286 ortholog_one2many 6 retrogenes
retro_chof_110, retro_chof_1840, retro_chof_2447, retro_chof_3, retro_chof_41, retro_chof_581,
Felis catus ENSFCAG00000009220 ortholog_one2one 1 retrogene
retro_fcat_42,
Macropus eugenii ENSMEUG00000010002 ortholog_one2one 1 retrogene
retro_meug_2119,
Mustela putorius furo ENSMPUG00000012043 ortholog_one2one 1 retrogene
retro_mputfur_885,
Ictidomys tridecemlineatus ENSSTOG00000003692 ortholog_one2one 1 retrogene
retro_itri_1118,
Vicugna pacos ENSVPAG00000010692 ortholog_one2one 1 retrogene
retro_vpac_368,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_422 64.84 80.26
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2. retro_sscr_1129 64.84 80.26
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Download FASTA sequences of all ENSSSCG00000021325 retrocopies