Parental gene: | MAPK6, ENSSSCG00000004624 |
| Aliases: | MAPK6, SUSERK3 |
| Description: | mitogen-activated protein kinase 6 [Source:HGNC Symbol;Acc:6879] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 1:132815457..132850067(-) |
>ENSSSCG00000004624
ATGGCAGAGAAATTTGAAAGTCTCATGAACATTCATGGTTTTGATCTGGGCTCTAGGTATATGGACTTAAAACCATTGGG
TTGTGGAGGCAATGGCTTGGTTTTTTCTGCTGTAGACAATGACTGTGACAAAAGAGTAGCCATCAAGAAAATAGTCCTTA
CTGATCCCCAGAGTGTCAAACATGCTCTACGTGAAATTAAAATTATTAGAAGACTTGACCATGATAACATTGTGAAGGTG
TTTGAAATTCTTGGTCCTAGTGGAAGCCAGTTAACAGATGATGTGGGCTCTCTTACCGAACTGAACAGTGTTTACATTGT
TCAGGAGTACATGGAGACAGACTTGGCTAATGTGCTGGAACAGGGCCCTTTACTGGAAGAGCATGCCAGGCTTTTCATGT
ATCAGCTGCTACGTGGGCTCAAATATATTCACTCAGCAAACGTACTGCACAGAGATCTCAAACCAGCTAATCTTTTCATT
AACACTGAAGACTTGGTGCTGAAGATAGGTGACTTTGGTCTTGCACGGATCATGGATCCCCATTATTCCCATAAGGGTCA
TCTTTCTGAAGGATTGGTTACTAAATGGTACAGATCTCCACGTCTTTTACTTTCTCCTAATAATTATACTAAAGCCATTG
ACATGTGGGCTGCAGGTTGCATCTTTGCTGAAATGCTGACTGGTAAAACTCTCTTTGCAGGTGCACATGAACTTGAACAG
ATGCAGCTGATTTTAGAATCTATTCCTGTTGTGCATGAGGAAGATCGTCAGGAGCTTCTCAGCGTAATTCCAGTTTACAT
TAGAAATGATATGACTGAGCCACACAAACCTTTAACTCAGCTGCTTCCAGGAATTAGTCGAGAAGCACTGGATTTCCTGG
AACAAATTTTGACTTTTAGCCCCATGGATCGGTTGACAGCAGAAGAAGCGCTTTCCCATCCTTACATGAGCATTTATTCT
TTTCCAATGGATGAGCCTATTTCAAGTCATCCTTTTCATATTGAAGATGAAGTTGATGATATTTTGCTTATGGATGAAAC
TCATAGTCACATTTATAACTGGGAAAGGTACCATGATTGTCAGTTTTCAGAGCATGATTGGCCTATACATAACAACTTTG
ATATTGACGAAGTTCAGCTTGACCCAAGAGCTCTGTCTGATGTCACTGACGAAGAAGAAGTACAAGTCGATCCTCGAAAA
TATTTGGATGGAGATCGTGAAAAGTATTTGGAGGATCCTGCTTTTGATACCAATTACTCTACTGAGCCTTGTTGGCAGTA
CCCAGATCATCATGAAAACAAATATTGTGATCTGGAGTGTAGCCATACTTGTAACTACAAAACCAGGTCATCATCCTATT
TAGATAATTTAGTTTGGAGAGAGAGTGAAGTTAATCATTACTATGAACCCAAGCTTATTATAGATCTTTCCAATTGGAAA
GAACAAAGCAAAGAAAAATCTGATAAGAAAGGCAAGTCAAAATGTGAAAAGAATGGATTGGTTAAAGCCCAGATAGCCCT
AGAGGAAGCATCACAGCAGTTGGCTGAAAAAGAAAGGGAAAAGAATCAGGGATTTGACTTTGATTCCTTTATTGCAGGAA
CTATTCAACTTAGTTCACAACATGAGCCTACTGATGTTGTTGACAAATTAAATGACTTGAATAGCTCAGTGTCCCAACTA
GAATTGAAAAGTTTGATATCGAAGTCAGTAAGCCGAGAAAAACAGGAAAAAGGAAAGGCAAATTTAGCTCAGTTAGAAGC
CTTGTACCAGTCTTCTTGGGATAGCCAGTTTGTGGGTGGTGGAGAGGACTGTTTTCTCATAAATCAGTTTTGTTGTGAGG
TAAGGAAGGATGAGCATATTGAAAAGGAAAATAATTACACCAGTTACCTGGACAAGTTCTTTAGCAGGAAGGAAGATACT
GAAATGCTAGAAACTGAGCCGGTAGAAGATGGGAAGCTTGGGGAGAGAGAAAATGAGGAAGGATTTCTGAATAACAGTGG
GGAGTTCCTCTTTAACAAGCAGCTTGAATCCATAGGCATCCCGCAGTTTCACAGTCCAGTTGGGTCACCGCTTAAGTCAA
TACAGGCCACATTAACACCTTCTGCTATGAAATCTTCCCCTCAGATTCCTCATAAAACATACAGCAGCATTCTGAAACAT
CTGAACTAA
ATGGCAGAGAAATTTGAAAGTCTCATGAACATTCATGGTTTTGATCTGGGCTCTAGGTATATGGACTTAAAACCATTGGG
TTGTGGAGGCAATGGCTTGGTTTTTTCTGCTGTAGACAATGACTGTGACAAAAGAGTAGCCATCAAGAAAATAGTCCTTA
CTGATCCCCAGAGTGTCAAACATGCTCTACGTGAAATTAAAATTATTAGAAGACTTGACCATGATAACATTGTGAAGGTG
TTTGAAATTCTTGGTCCTAGTGGAAGCCAGTTAACAGATGATGTGGGCTCTCTTACCGAACTGAACAGTGTTTACATTGT
TCAGGAGTACATGGAGACAGACTTGGCTAATGTGCTGGAACAGGGCCCTTTACTGGAAGAGCATGCCAGGCTTTTCATGT
ATCAGCTGCTACGTGGGCTCAAATATATTCACTCAGCAAACGTACTGCACAGAGATCTCAAACCAGCTAATCTTTTCATT
AACACTGAAGACTTGGTGCTGAAGATAGGTGACTTTGGTCTTGCACGGATCATGGATCCCCATTATTCCCATAAGGGTCA
TCTTTCTGAAGGATTGGTTACTAAATGGTACAGATCTCCACGTCTTTTACTTTCTCCTAATAATTATACTAAAGCCATTG
ACATGTGGGCTGCAGGTTGCATCTTTGCTGAAATGCTGACTGGTAAAACTCTCTTTGCAGGTGCACATGAACTTGAACAG
ATGCAGCTGATTTTAGAATCTATTCCTGTTGTGCATGAGGAAGATCGTCAGGAGCTTCTCAGCGTAATTCCAGTTTACAT
TAGAAATGATATGACTGAGCCACACAAACCTTTAACTCAGCTGCTTCCAGGAATTAGTCGAGAAGCACTGGATTTCCTGG
AACAAATTTTGACTTTTAGCCCCATGGATCGGTTGACAGCAGAAGAAGCGCTTTCCCATCCTTACATGAGCATTTATTCT
TTTCCAATGGATGAGCCTATTTCAAGTCATCCTTTTCATATTGAAGATGAAGTTGATGATATTTTGCTTATGGATGAAAC
TCATAGTCACATTTATAACTGGGAAAGGTACCATGATTGTCAGTTTTCAGAGCATGATTGGCCTATACATAACAACTTTG
ATATTGACGAAGTTCAGCTTGACCCAAGAGCTCTGTCTGATGTCACTGACGAAGAAGAAGTACAAGTCGATCCTCGAAAA
TATTTGGATGGAGATCGTGAAAAGTATTTGGAGGATCCTGCTTTTGATACCAATTACTCTACTGAGCCTTGTTGGCAGTA
CCCAGATCATCATGAAAACAAATATTGTGATCTGGAGTGTAGCCATACTTGTAACTACAAAACCAGGTCATCATCCTATT
TAGATAATTTAGTTTGGAGAGAGAGTGAAGTTAATCATTACTATGAACCCAAGCTTATTATAGATCTTTCCAATTGGAAA
GAACAAAGCAAAGAAAAATCTGATAAGAAAGGCAAGTCAAAATGTGAAAAGAATGGATTGGTTAAAGCCCAGATAGCCCT
AGAGGAAGCATCACAGCAGTTGGCTGAAAAAGAAAGGGAAAAGAATCAGGGATTTGACTTTGATTCCTTTATTGCAGGAA
CTATTCAACTTAGTTCACAACATGAGCCTACTGATGTTGTTGACAAATTAAATGACTTGAATAGCTCAGTGTCCCAACTA
GAATTGAAAAGTTTGATATCGAAGTCAGTAAGCCGAGAAAAACAGGAAAAAGGAAAGGCAAATTTAGCTCAGTTAGAAGC
CTTGTACCAGTCTTCTTGGGATAGCCAGTTTGTGGGTGGTGGAGAGGACTGTTTTCTCATAAATCAGTTTTGTTGTGAGG
TAAGGAAGGATGAGCATATTGAAAAGGAAAATAATTACACCAGTTACCTGGACAAGTTCTTTAGCAGGAAGGAAGATACT
GAAATGCTAGAAACTGAGCCGGTAGAAGATGGGAAGCTTGGGGAGAGAGAAAATGAGGAAGGATTTCTGAATAACAGTGG
GGAGTTCCTCTTTAACAAGCAGCTTGAATCCATAGGCATCCCGCAGTTTCACAGTCCAGTTGGGTCACCGCTTAAGTCAA
TACAGGCCACATTAACACCTTCTGCTATGAAATCTTCCCCTCAGATTCCTCATAAAACATACAGCAGCATTCTGAAACAT
CTGAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 18 .58 RPM |
| SRP014902_testis | 18 .95 RPM |
| SRP018856_adipose | 23 .90 RPM |
| SRP018288_kidney | 126 .28 RPM |
| SRP018288_lung | 48 .88 RPM |
| SRP018288_liver | 122 .49 RPM |
| SRP018288_heart | 77 .01 RPM |
| SRP035408_liver | 205 .61 RPM |
| SRP035408_brain | 71 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000001962 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030786 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000017091 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_162 | 90.99 | 65.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000004624 retrocopies