Parental gene: | CCNE1, ENSSSCG00000002855 |
| Aliases: | None |
| Description: | cyclin E1 [Source:HGNC Symbol;Acc:1589] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 6:35242726..35254034(+) |
>ENSSSCG00000002855
ATGCCGAGGGAGAAGAAGGAAAGGGATGCGAAGGAACCTGACACTATGAAAGAGGAAAGTGGCACTGATGTCTCTGTTCG
CTCCAGGAAAAGGAAGGCAAATGTGGCCGTTTTTTTGCAAGATCCAGATGAAGATGTGGCCAAAATTGACAGAACTGTGA
GAAGCCAGTGTGGCAATCAGCCTTGGGACAATAATGCAGCCTGTGAAAACCCCTGTTCCTTCATTCCCACACCTGACAAA
GAAGAGGATGAGCTTGTGTACCCAAATTCTGTGTATAAGCCTCAGAGTTGCACACCATCCAGAGCCTCGCCACTGCCTAT
ACTGAACTGGGCAAATAGAGAGGAGGTATGGAAAATCATGTTAAACAAGGAAAAGACGTACTTGAGGGATAAGCACCTTA
TGCAGCGGCACCCTCTTCTGCAGCCTAAAATGCGAGCGATTCTTCTGGATTGGTTAATGGAGGTGTGTGAAGTCTATAAA
CTTCATAGAGAGACATTTTACTTGGCACAGGATTTCTTTGATCGGTATATGGCAACACAACAAAATGTTGTAAAAACGCT
TTTACAGCTTATTGGGATTTCATCTTTATTTATTGCTGCCAAACTTGAGGAAATCTACCCTCCAAAGTTGCACCAGTTTG
CTTATGTTACAGATGGGGCTTGTTCAGGAGATGAAATTCTTACCATGGAATTAATCATTATGAAGGCCCTTAAGTGGCAT
CTCAGTCCCCTGACCATTGTGTCCTGGCTGAATGTATACATGCAGGTTGCATATCTAAATGATTTTTATGAAGTGCTCCT
GCCACAGTATCCCCAGCAAATCTTCATACAGATCGCAGAGCTCCTAGATCTCTGTGTCCTGGATGTTGGCTGCTTAGAAT
TTCCCTATGGTGTACTTGCTGCTTCTGCCTTGTATCATTTCTCTTCATCCGAGTTGATGCAGAAGGTTTCAGGGTATCAG
TGGTGTGATATAGAGAAGTGTGTCAAGTGGATGGTTCCATTTGCCATGGTTATAAGGGAGACAGGAAGCTCAAAACTTAA
GCACTTCAGAGGGGTTCCTGCTGAAGATGCCCATAACATCCAGACCCATATAAACAGCTTGGATTTGCTGGACAAAGCCC
AAGCAAAGAAAGCCATATTGTCTGAAGAAAATAGGATTTCTCCTCTCCCCACTGGAGTCCTCACCCCGCCACCGAGCAGT
AAGAAGCAGAGCAGTGGGCAGGGAACAGCATGA
ATGCCGAGGGAGAAGAAGGAAAGGGATGCGAAGGAACCTGACACTATGAAAGAGGAAAGTGGCACTGATGTCTCTGTTCG
CTCCAGGAAAAGGAAGGCAAATGTGGCCGTTTTTTTGCAAGATCCAGATGAAGATGTGGCCAAAATTGACAGAACTGTGA
GAAGCCAGTGTGGCAATCAGCCTTGGGACAATAATGCAGCCTGTGAAAACCCCTGTTCCTTCATTCCCACACCTGACAAA
GAAGAGGATGAGCTTGTGTACCCAAATTCTGTGTATAAGCCTCAGAGTTGCACACCATCCAGAGCCTCGCCACTGCCTAT
ACTGAACTGGGCAAATAGAGAGGAGGTATGGAAAATCATGTTAAACAAGGAAAAGACGTACTTGAGGGATAAGCACCTTA
TGCAGCGGCACCCTCTTCTGCAGCCTAAAATGCGAGCGATTCTTCTGGATTGGTTAATGGAGGTGTGTGAAGTCTATAAA
CTTCATAGAGAGACATTTTACTTGGCACAGGATTTCTTTGATCGGTATATGGCAACACAACAAAATGTTGTAAAAACGCT
TTTACAGCTTATTGGGATTTCATCTTTATTTATTGCTGCCAAACTTGAGGAAATCTACCCTCCAAAGTTGCACCAGTTTG
CTTATGTTACAGATGGGGCTTGTTCAGGAGATGAAATTCTTACCATGGAATTAATCATTATGAAGGCCCTTAAGTGGCAT
CTCAGTCCCCTGACCATTGTGTCCTGGCTGAATGTATACATGCAGGTTGCATATCTAAATGATTTTTATGAAGTGCTCCT
GCCACAGTATCCCCAGCAAATCTTCATACAGATCGCAGAGCTCCTAGATCTCTGTGTCCTGGATGTTGGCTGCTTAGAAT
TTCCCTATGGTGTACTTGCTGCTTCTGCCTTGTATCATTTCTCTTCATCCGAGTTGATGCAGAAGGTTTCAGGGTATCAG
TGGTGTGATATAGAGAAGTGTGTCAAGTGGATGGTTCCATTTGCCATGGTTATAAGGGAGACAGGAAGCTCAAAACTTAA
GCACTTCAGAGGGGTTCCTGCTGAAGATGCCCATAACATCCAGACCCATATAAACAGCTTGGATTTGCTGGACAAAGCCC
AAGCAAAGAAAGCCATATTGTCTGAAGAAAATAGGATTTCTCCTCTCCCCACTGGAGTCCTCACCCCGCCACCGAGCAGT
AAGAAGCAGAGCAGTGGGCAGGGAACAGCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 4 .91 RPM |
| SRP014902_testis | 1 .41 RPM |
| SRP018856_adipose | 3 .45 RPM |
| SRP018288_kidney | 1 .77 RPM |
| SRP018288_lung | 3 .77 RPM |
| SRP018288_liver | 2 .40 RPM |
| SRP018288_heart | 0 .73 RPM |
| SRP035408_liver | 3 .64 RPM |
| SRP035408_brain | 9 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001857 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009143 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006217 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000001390 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_232 | 92.80 | 60.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000002855 retrocopies