Parental gene: | PMM1, ENSSSCG00000000061 |
| Aliases: | None |
| Description: | phosphomannomutase 1 [Source:HGNC Symbol;Acc:9114] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 5:4336773..4347697(+) |
>ENSSSCG00000000061
ATGGCGGTCACCGCTGAGGGCGCCCGTAGGAAGGAGCGCGTCCTCTGCCTGTTTGACGTGGACGGTACCCTCACGCCGGC
TCGCCAGAAAATTGACCCTGAGGTGGCTGCCTTCCTGCAGAAGCTGCGCAGTAGGGTGCAGATCGGCGTGGTGGGCGGCT
CCGACTACTCTAAGATTGCCGAGCAGCTGGGAGAGGGGGATGAAGTCGTCGAGAAGTTTGATTATGTGTTTGCTGAGAAC
GGAACCGTGCAGTATAAGCACGGACGACTACTGTCCAAGCAGACCATCCAGAACCACCTGGGCGAGGAACTCCTGCAGGA
CTTGATCAATTTCTGCCTCCACTACATGGCCCTGCTCAGGCTGCCCAAGAAGCGGGGAACCTTCATCGAGTTCCGGAACG
GCATGCTGAACATCTCGCCCATCGGCCGCAGCTGCACCCTGGAGGAGCGCATCGAGTTCTCCGAGCTGGACAAGAAGGAG
AAGATCCGGGAGAAGTTTGTGGAAGCCCTGAAAACAGAATTTGCCGGCAAAGGGCTGAGGTTCTCCCGAGGAGGCATGAT
CAGCTTTGACGTCTTCCCTGAGGGCTGGGACAAGCGCTACTGCCTGGACTGCCTGGACCAGGACTGCTTTGACACCATCC
ACTTCTTTGGGAATGAGACCAGCCCTGGCGGGAACGACTTTGAAATCTACACCGACCCCCGGACCGTTGGCCACAGCGTG
GTGTCCCCGCAGGACACCGTGCAGCGATGCCGGGAGATATTTTTCCCAGAGACGGCTCACGAGGCGTGA
ATGGCGGTCACCGCTGAGGGCGCCCGTAGGAAGGAGCGCGTCCTCTGCCTGTTTGACGTGGACGGTACCCTCACGCCGGC
TCGCCAGAAAATTGACCCTGAGGTGGCTGCCTTCCTGCAGAAGCTGCGCAGTAGGGTGCAGATCGGCGTGGTGGGCGGCT
CCGACTACTCTAAGATTGCCGAGCAGCTGGGAGAGGGGGATGAAGTCGTCGAGAAGTTTGATTATGTGTTTGCTGAGAAC
GGAACCGTGCAGTATAAGCACGGACGACTACTGTCCAAGCAGACCATCCAGAACCACCTGGGCGAGGAACTCCTGCAGGA
CTTGATCAATTTCTGCCTCCACTACATGGCCCTGCTCAGGCTGCCCAAGAAGCGGGGAACCTTCATCGAGTTCCGGAACG
GCATGCTGAACATCTCGCCCATCGGCCGCAGCTGCACCCTGGAGGAGCGCATCGAGTTCTCCGAGCTGGACAAGAAGGAG
AAGATCCGGGAGAAGTTTGTGGAAGCCCTGAAAACAGAATTTGCCGGCAAAGGGCTGAGGTTCTCCCGAGGAGGCATGAT
CAGCTTTGACGTCTTCCCTGAGGGCTGGGACAAGCGCTACTGCCTGGACTGCCTGGACCAGGACTGCTTTGACACCATCC
ACTTCTTTGGGAATGAGACCAGCCCTGGCGGGAACGACTTTGAAATCTACACCGACCCCCGGACCGTTGGCCACAGCGTG
GTGTCCCCGCAGGACACCGTGCAGCGATGCCGGGAGATATTTTTCCCAGAGACGGCTCACGAGGCGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 25 .88 RPM |
| SRP014902_testis | 18 .39 RPM |
| SRP018856_adipose | 13 .02 RPM |
| SRP018288_kidney | 191 .00 RPM |
| SRP018288_lung | 7 .54 RPM |
| SRP018288_liver | 12 .47 RPM |
| SRP018288_heart | 2 .80 RPM |
| SRP035408_liver | 30 .15 RPM |
| SRP035408_brain | 34 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Sus scrofa | ENSSSCG00000021236 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_869 | 54.69 | 92.37 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000000061 retrocopies