Parental gene:

RAP1B, ENSSHAG00000011497

Aliases:None
Description:RAP1B, member of RAS oncogene family [Source:HGNC Symbol;Acc:9857]
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL861557.1:858120..871662(-)


>ENSSHAG00000011497
ATGCGTGAATACAAGCTAGTTGTTCTTGGTTCGGGAGGTGTTGGGAAGTCTGCCTTGACTGTACAGTTTGTTCAAGGAAT
ATTTGTTGAAAAATATGATCCAACGATAGAAGATTCATATAGAAAGCAAGTTGAAGTAGATGCTCAACAATGCATGCTTG
AAATCTTGGACACTGCAGGAACGGAACAATTTACAGCAATGAGAGATTTATACATGAAAAATGGACAAGGCTTTGCATTG
GTCTACTCCATCACAGCACAGTCCACGTTTAATGATTTACAAGATCTTCGAGAACAGATACTTCGAGTTAAAGATACTGA
TGATGTGCCAATGATTCTTGTTGGTAATAAGTGTGACTTGGAAGATGAAAGAGTCGTAGGTAAAGAGCAAGGACAGAACC
TAGCAAGACAATGGAACAACTGTGCATTCTTAGAATCTTCCGCTAAATCAAAGATAAACGTTAATGAGATCTTTTATGAC
CTAGTACGGCAAATTAACAGAAAAACTCCAGTGCCTGGGAAGGCACGTAAAAAGTCTTCATGTCAATTGCTTTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008637 possible_ortholog 1 retrogene
retro_amel_103,
Callithrix jacchus ENSCJAG00000007261 ortholog_one2one 3 retrogenes
retro_cjac_1435, retro_cjac_2371, retro_cjac_607,
Cavia porcellus ENSCPOG00000008272 possible_ortholog 4 retrogenes
retro_cpor_1194, retro_cpor_632, retro_cpor_739, retro_cpor_85,
Gorilla gorilla ENSGGOG00000025649 ortholog_one2one 1 retrogene
retro_ggor_2836,
Loxodonta africana ENSLAFG00000016460 possible_ortholog 1 retrogene
retro_lafr_482,
Mus musculus ENSMUSG00000052681 ortholog_one2one 1 retrogene
retro_mmus_1370,
Nomascus leucogenys ENSNLEG00000003573 ortholog_one2one 2 retrogenes
retro_nleu_1034, retro_nleu_481,
Otolemur garnettii ENSOGAG00000005746 ortholog_one2one 2 retrogenes
retro_ogar_2260, retro_ogar_272,
Sarcophilus harrisii ENSSHAG00000012747 other_paralog 1 retrogene
retro_shar_648,
Sus scrofa ENSSSCG00000030014 possible_ortholog 2 retrogenes
retro_sscr_435, retro_sscr_909,
Tupaia belangeri ENSTBEG00000013380 ortholog_one2one 4 retrogenes
retro_tbel_2145, retro_tbel_4650, retro_tbel_4658, retro_tbel_613,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_425 92.31 63.59
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Download FASTA sequences of all ENSSHAG00000011497 retrocopies