Parental gene: | DNAJC9, ENSPTRG00000034219 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 10:71833245..71837707(-) |
>ENSPTRG00000034219
ATGGGGCTGCTGGACCTTTGCGAGGAAGTGTTCGGCACCGCCGACCTTTACCGGGTGCTGGGCGTGCGACGCGAGGCCTC
CGACGGCGAGGTCCGACGAGGCTACCACAAGGTGTCCCTGCAGGTACACCCGGACCGGGTGGGCGAGGGCGACAAGGAGG
ACGCCACCCGCCGCTTCCAGATCCTGGGAAAAGTCTATTCCGTTCTCAGTGACGGAGAACAGAGAGCAGTGTACGATGAG
CAGGGAACAGTGGACGAGGACTCTACTGTGCTCACCCAAGACCGAGACTGGGAGGCGTATTGGCGGCTACTCTTTAAAAA
GATATCTTTAGAGGACATTCAAGCTTTTGAAAAGACATACAAAGGTTCGGAAGAAGAGCTGGCTGATATTAAGCAGGCCT
ATCTGGACTTCAGGGGTGACATGGATCAGATCATGGAGTCTGTGCTTTGCGTGCAGTACACAGAGGAACCCAGGATAAGG
AATATCATTCAGCAAGCTATTGACGCCGGAGAGGTCCCATCCTATAATGCCTTTGTCAAAGAATCGAAACAGAAGATGAA
TGCAAGGAAAAGGAGGGCTCAGGAAGAGGCCAAAGAAGCAGAAATGAGCAGAAAGGAGTTGGGGCTTGATGAAGGCGTGG
ATAGCCTGAAGGCAGCCATTCAGAGCAGACAAAAGGATCGGCAAAAGGAAATGGACAATTTTCTGGCTCAGATGGAAGCA
AAGTACTGCAAATCTTCCAAAGGAGGAGGGAAAAAATCTGCTCTCAAGAAAGAAAAGAAATAA
ATGGGGCTGCTGGACCTTTGCGAGGAAGTGTTCGGCACCGCCGACCTTTACCGGGTGCTGGGCGTGCGACGCGAGGCCTC
CGACGGCGAGGTCCGACGAGGCTACCACAAGGTGTCCCTGCAGGTACACCCGGACCGGGTGGGCGAGGGCGACAAGGAGG
ACGCCACCCGCCGCTTCCAGATCCTGGGAAAAGTCTATTCCGTTCTCAGTGACGGAGAACAGAGAGCAGTGTACGATGAG
CAGGGAACAGTGGACGAGGACTCTACTGTGCTCACCCAAGACCGAGACTGGGAGGCGTATTGGCGGCTACTCTTTAAAAA
GATATCTTTAGAGGACATTCAAGCTTTTGAAAAGACATACAAAGGTTCGGAAGAAGAGCTGGCTGATATTAAGCAGGCCT
ATCTGGACTTCAGGGGTGACATGGATCAGATCATGGAGTCTGTGCTTTGCGTGCAGTACACAGAGGAACCCAGGATAAGG
AATATCATTCAGCAAGCTATTGACGCCGGAGAGGTCCCATCCTATAATGCCTTTGTCAAAGAATCGAAACAGAAGATGAA
TGCAAGGAAAAGGAGGGCTCAGGAAGAGGCCAAAGAAGCAGAAATGAGCAGAAAGGAGTTGGGGCTTGATGAAGGCGTGG
ATAGCCTGAAGGCAGCCATTCAGAGCAGACAAAAGGATCGGCAAAAGGAAATGGACAATTTTCTGGCTCAGATGGAAGCA
AAGTACTGCAAATCTTCCAAAGGAGGAGGGAAAAAATCTGCTCTCAAGAAAGAAAAGAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 15 .68 RPM |
| SRP007412_cerebellum | 22 .05 RPM |
| SRP007412_heart | 8 .28 RPM |
| SRP007412_kidney | 14 .96 RPM |
| SRP007412_liver | 15 .97 RPM |
| SRP007412_testis | 37 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016933 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000004448 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000213551 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015046 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000004539 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000003792 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016595 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003496 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000002343 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000028067 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000011504 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_931 | 92.54 | 77.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1414 | 89.43 | 94.23 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000034219 retrocopies