Parental gene: | ZCCHC7, ENSPTRG00000020939 |
| Aliases: | None |
| Description: | zinc finger, CCHC domain containing 7 [Source:HGNC Symbol;Acc:26209] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 9:37609920..37849981(+) |
>ENSPTRG00000020939
ATGATGTTTGGTGGCTATGAGACTATAGAAGCATACGAAGATGATCTTTATCGAGATGAGTCATCTAGTGAACTGAGTGT
TGATAGTGAGGTGGAATTTCAACTCTATAGCCAAGTTCATTATGCCCAAGATCTTGATGATGTCATCAGGGAGGAAGAGC
ATGAAGAAAAGAACTCTGGGAATTCGGAATCTTCAAGTAGTAAACCAAATCAGAAGAAGCTAATCGTCCTTTCAGATAGT
GAGGTCATCCAGCTGTCAGATGGGTCAGAGGTCATCACTTTGTCTGATGAAGACAGTATTTATAGATGTAAAGGAGAAGA
TGGTATAAACTGGTTCATCAGTGACAAAGACATTGAGGCCCAGATAGCTAATAACCGAACACCTGGAAGATGGACCCAGC
GGTACTATTCAGCCAACAAAAACATTATCTGTAGAAATTGTGACAAACGTGGCCATTTATCAAAAAACTGCCCCTTACCA
CGAAAAGTTCGTCGCTGCTTCCTGTGCTCCAGGAGAGGACATCTCCTGTATTCCTGTCCAGCCCCCCTTTGCGAATACTG
TCCTGTGCCTAAGATGTTGGACCACTCATGTCTTTTCAGACATTCCTGGGATAAACAGTGTGACCGATGTCATATGCTAG
GCCACTATACAGATGCTGGCACAGAAATCTGGAGGCAGTATCACCTAACGACCAAACCTGGACCACCCAAAAAGCCGAAG
ACCCCTTCAAGACCATCAGCCTTAGCATATTGCTATCACTGCGCGCAAAAAGGCCATTATGGACACGAATGTCCAGAAAG
AGAAGTGTATGACCCGTCTCCAGTATCTCCATTCATCTGCTACTATGATGACAAATATGAAATTCAGGAGAGAGAAAAGA
GACTAAAACAAAAAATAAAAGTACTCAAGAAAAATGGGGTTATCCCAGAGCCATCCAAGCTACCTTATATAAAAGCAGCA
AATGAGAACCCCCACCATGATATAAGGAAGGGCCGTGCCTCATGGAAAAGCAACAGGTGGCCTCAAGAAAATAAAGAAAC
ACAAAAAGAAATGAAGAACAAGAATAGAAACTGGGAGAAGCACAGGAAGGCTGACAGACATCGTGAAGTGGATGAGGATT
TTCCCAGGGGCCCCAAAACCTACTCTTCTCCTGGCAGTTTTAAAACCCAGAAGCCTTCTAAGCCCTTTCACCGTTCATCA
CATTACCACACGTCAAGAGAAGACAAGTCTCCCAAGGAGGGCAAGAGGGGCAAGCAGAAGAAAAAGGAGAGGTGCTGGGA
AGATGATGACAATGATAACTTATTTCTTATTAAGCAGAGAAAAAAAAAGTCTTAA
ATGATGTTTGGTGGCTATGAGACTATAGAAGCATACGAAGATGATCTTTATCGAGATGAGTCATCTAGTGAACTGAGTGT
TGATAGTGAGGTGGAATTTCAACTCTATAGCCAAGTTCATTATGCCCAAGATCTTGATGATGTCATCAGGGAGGAAGAGC
ATGAAGAAAAGAACTCTGGGAATTCGGAATCTTCAAGTAGTAAACCAAATCAGAAGAAGCTAATCGTCCTTTCAGATAGT
GAGGTCATCCAGCTGTCAGATGGGTCAGAGGTCATCACTTTGTCTGATGAAGACAGTATTTATAGATGTAAAGGAGAAGA
TGGTATAAACTGGTTCATCAGTGACAAAGACATTGAGGCCCAGATAGCTAATAACCGAACACCTGGAAGATGGACCCAGC
GGTACTATTCAGCCAACAAAAACATTATCTGTAGAAATTGTGACAAACGTGGCCATTTATCAAAAAACTGCCCCTTACCA
CGAAAAGTTCGTCGCTGCTTCCTGTGCTCCAGGAGAGGACATCTCCTGTATTCCTGTCCAGCCCCCCTTTGCGAATACTG
TCCTGTGCCTAAGATGTTGGACCACTCATGTCTTTTCAGACATTCCTGGGATAAACAGTGTGACCGATGTCATATGCTAG
GCCACTATACAGATGCTGGCACAGAAATCTGGAGGCAGTATCACCTAACGACCAAACCTGGACCACCCAAAAAGCCGAAG
ACCCCTTCAAGACCATCAGCCTTAGCATATTGCTATCACTGCGCGCAAAAAGGCCATTATGGACACGAATGTCCAGAAAG
AGAAGTGTATGACCCGTCTCCAGTATCTCCATTCATCTGCTACTATGATGACAAATATGAAATTCAGGAGAGAGAAAAGA
GACTAAAACAAAAAATAAAAGTACTCAAGAAAAATGGGGTTATCCCAGAGCCATCCAAGCTACCTTATATAAAAGCAGCA
AATGAGAACCCCCACCATGATATAAGGAAGGGCCGTGCCTCATGGAAAAGCAACAGGTGGCCTCAAGAAAATAAAGAAAC
ACAAAAAGAAATGAAGAACAAGAATAGAAACTGGGAGAAGCACAGGAAGGCTGACAGACATCGTGAAGTGGATGAGGATT
TTCCCAGGGGCCCCAAAACCTACTCTTCTCCTGGCAGTTTTAAAACCCAGAAGCCTTCTAAGCCCTTTCACCGTTCATCA
CATTACCACACGTCAAGAGAAGACAAGTCTCCCAAGGAGGGCAAGAGGGGCAAGCAGAAGAAAAAGGAGAGGTGCTGGGA
AGATGATGACAATGATAACTTATTTCTTATTAAGCAGAGAAAAAAAAAGTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .65 RPM |
| SRP007412_cerebellum | 8 .17 RPM |
| SRP007412_heart | 4 .20 RPM |
| SRP007412_kidney | 5 .94 RPM |
| SRP007412_liver | 6 .97 RPM |
| SRP007412_testis | 20 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000147905 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007421 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029763 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000006054 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_917 | 74.05 | 64.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2962 | 75.44 | 62.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000020939 retrocopies