Parental gene: | SH3GL2, ENSPTRG00000020792 |
| Aliases: | None |
| Description: | SH3-domain GRB2-like 2 [Source:HGNC Symbol;Acc:10831] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 9:17841591..18059966(+) |
>ENSPTRG00000020792
ATGTCGGTGGCCGGCCTCAAGAAGCAGTTCCATAAAGCCACTCAGAAAGTGAGTGAGAAGGTTGGAGGAGCTGAAGGAAC
CAAGCTAGATGATGACTTCAAAGAGATGGAAAGGAAAGTGGATGTCACCAGCAGGGCTGTGATGGAAATAATGACTAAAA
CAATTGAATACCTTCAACCCAATCCAGCTTCCAGAGCTAAGCTCAGCATGATCAACACCATGTCAAAAATCCGTGGCCAG
GAGAAGGGGCCAGGCTATCCTCAGGCAGAGGCGCTGCTGGCGGAGGCCATGCTCAAATTTGGAAGAGAGCTTGGAGATGA
TTGCAACTTTGGCCCAGCACTTGGTGAGGTCGGGGAGGCCATGCGGGAACTGTCGGAGGTCAAAGACTCTTTGGACATAG
AAGTGAAGCAGAACTTCATTGACCCTCTTCAGAATCTTCATGACAAAGATCTTAGGGAAATTCAACATCATCTAAAGAAG
TTGGAGGGTCGACGCCTGGATTTTGATTATAAGAAGAAACGACAAGGCAAGATTCCGGATGAAGAGCTTCGTCAAGCTCT
AGAGAAATTTGATGAGTCTAAGGAAATTGCTGAGTCAAGCATGTTCAATCTCTTGGAGATGGATATTGAACAAGTGAGCC
AGCTCTCTGCACTTGTGCAAGCTCAGCTGGAGTACCACAAGCAGGCAGTCCAGATCCTGCAGCAAGTCACGGTCAGACTG
GAAGAAAGAATAAGACAGGCTTCATCTCAGCCTAGAAGGGAATATCAACCTAAACCACGAATGAGCCTGGAGTTTCCAAC
TGGAGACAGTACTCAGCCCAATGGGGGTCTCTCCCACACAGGCACTCCCAAACCTTCAGGTGTCCAAATGGATCAGCCCT
GCTGCCGAGCTCTGTACGACTTTGAACCTGAAAATGAAGGGGAGTTGGGATTTAAAGAGGGCGATATCATCACACTCACT
AACCAAATTGATGAGAACTGGTATGAGGGGATGCTGCATGGCCATTCAGGCTTCTTCCCCATCAATTATGTGGAAATTCT
GGTTGCCCTGCCCCATTAG
ATGTCGGTGGCCGGCCTCAAGAAGCAGTTCCATAAAGCCACTCAGAAAGTGAGTGAGAAGGTTGGAGGAGCTGAAGGAAC
CAAGCTAGATGATGACTTCAAAGAGATGGAAAGGAAAGTGGATGTCACCAGCAGGGCTGTGATGGAAATAATGACTAAAA
CAATTGAATACCTTCAACCCAATCCAGCTTCCAGAGCTAAGCTCAGCATGATCAACACCATGTCAAAAATCCGTGGCCAG
GAGAAGGGGCCAGGCTATCCTCAGGCAGAGGCGCTGCTGGCGGAGGCCATGCTCAAATTTGGAAGAGAGCTTGGAGATGA
TTGCAACTTTGGCCCAGCACTTGGTGAGGTCGGGGAGGCCATGCGGGAACTGTCGGAGGTCAAAGACTCTTTGGACATAG
AAGTGAAGCAGAACTTCATTGACCCTCTTCAGAATCTTCATGACAAAGATCTTAGGGAAATTCAACATCATCTAAAGAAG
TTGGAGGGTCGACGCCTGGATTTTGATTATAAGAAGAAACGACAAGGCAAGATTCCGGATGAAGAGCTTCGTCAAGCTCT
AGAGAAATTTGATGAGTCTAAGGAAATTGCTGAGTCAAGCATGTTCAATCTCTTGGAGATGGATATTGAACAAGTGAGCC
AGCTCTCTGCACTTGTGCAAGCTCAGCTGGAGTACCACAAGCAGGCAGTCCAGATCCTGCAGCAAGTCACGGTCAGACTG
GAAGAAAGAATAAGACAGGCTTCATCTCAGCCTAGAAGGGAATATCAACCTAAACCACGAATGAGCCTGGAGTTTCCAAC
TGGAGACAGTACTCAGCCCAATGGGGGTCTCTCCCACACAGGCACTCCCAAACCTTCAGGTGTCCAAATGGATCAGCCCT
GCTGCCGAGCTCTGTACGACTTTGAACCTGAAAATGAAGGGGAGTTGGGATTTAAAGAGGGCGATATCATCACACTCACT
AACCAAATTGATGAGAACTGGTATGAGGGGATGCTGCATGGCCATTCAGGCTTCTTCCCCATCAATTATGTGGAAATTCT
GGTTGCCCTGCCCCATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 191 .47 RPM |
| SRP007412_cerebellum | 262 .52 RPM |
| SRP007412_heart | 22 .27 RPM |
| SRP007412_kidney | 34 .00 RPM |
| SRP007412_liver | 0 .07 RPM |
| SRP007412_testis | 8 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010823 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000001689 | ortholog_one2many | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000015197 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000000273 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_576 | 64.02 | 60.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000020792 retrocopies