Parental gene:

PSIP1, ENSPTRG00000020786

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:9:15717005..15767195(-)


>ENSPTRG00000020786
ATGACTCGCGATTTCAAACCTGGAGACCTCATCTTCGCCAAGATGAAAGGTTATCCCCATTGGCCAGCTCGAGTAGACGA
AGTTCCTGATGGAGCTGTAAAGCCACCCACAAACAAACTACCCATTTTCTTTTTTGGAACTCATGAGACTGCTTTTTTAG
GACCAAAGGATATATTTCCTTACTCAGAAAATAAGGAAAAGTATGGCAAACCAAATAAAAGAAAAGGTTTTAATGAAGGT
TTATGGGAGATAGATAACAATCCAAAAGTGAAATTTTCAAGTCAACAGGCAGCAACTAAACAATCAAATGCATCATCTGA
TGTTGAAGTTGAAGAAAAGGAAACTAGTGTTTCAAAGGAAGATACCGACCATGAAGAAAAAGCCAGCAATGAGGATGTGA
CTAAAGCAGTTGACATAACTACTCCAAAAGCTGCCAGAAGGGGGAGAAAGAGAAAGGCAGAAAAACAAGTAGAAACTGAG
GAGGCAGGAGTAGTGACAACAGCAACAGCATCTGTTAATCTAAAAGTGAGTCCTAAAAGAGGACGACCTGCAGCTACAGA
AGTCAAGATTCCAAAACCAAGAGGCAGACCCAAAATGGTAAAACAGCCCTGTCCTTCAGAGAGTGACATCATTACTGAAG
AGGACAAAAGTAAGAAAAAGGGGCAAGAGGAAAAACAACCTAAAAAGCAGCCTAAGAAGGATGAAGAGGGCCAGAAGGAA
GAAGATAAGCCAAGAAAAGAGCCGGATAAAAAAGAGGGGAAGAAAGAAGTTGAATCAAAAAGGAAAAATTTAGCTAAAAC
AGGGGTTACTTCAACCTCCGATTCTGAAGAAGAAGGAGATGATCAAGAAGGTGAAAAGAAGAGAAAAGGTGGGAGGAACT
TTCAGACTGCTCACAGAAGGAATATGCTGAAAGGCCAACATGAGAAAGAAGCAGCAGATCGAAAACGCAAGCAAGAGGAA
CAAATGGAAACTGAGCAGCAGAATAAAGATGAAGGAAAGAAGCCAGAAGTTAAGAAAGTGGAGAAGAAGCGAGAAACATC
AATGGATTCTCGACTTCAAAGGATACATGCTGAGATTAAAAATTCACTCAAAATTGATAATCTTGATGTGAACAGATGCA
TTGAGGCCTTGGATGAACTTGCTTCACTTCAGGTCACAATGCAACAAGCTCAGAAACACACAGAGATGATTACTACACTG
AAAAAAATACGGCGATTCAAAGTTAGTCAGGTTATCATGGAAAAGTCTACAATGTTGTATAACAAGTTTAAGAACATGTT
CTTGGTTGGTGAAGGAGATTCCGTGATCACACAAGTGCTGAATAAATCTCTTGCTGAACAAAGACAGCATGAGGAAGCGA
ATAAAACCAAAGATCAAGGGAAGAAAGGGCCAAACAAAAAGCTAGAGAAGGAACAAACAGGGTCAAAGACTCTAAATGGA
GGATCTGATGCTCAAGATGGTAATCAGCCACAACATAACGGGGAGAGCAATGAAGACAGCAAAGACAACCATGAAGCCAG
CACGAAGAAAAAGCCATCCAGTGAAGAGAGAGAGACTGAAATATCTCTGAAGGATTCTACACTAGATAACTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 60 .15 RPM
SRP007412_cerebellum 130 .49 RPM
SRP007412_heart 19 .53 RPM
SRP007412_kidney 31 .46 RPM
SRP007412_liver 10 .41 RPM
SRP007412_testis 166 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012471 ortholog_one2one 1 retrogene
retro_cjac_4069,
Homo sapiens ENSG00000164985 ortholog_one2one 1 retrogene
retro_hsap_4136,
Mus musculus ENSMUSG00000028484 ortholog_one2one 1 retrogene
retro_mmus_2896,
Pan troglodytes ENSPTRG00000001474 within_species_paralog 1 retrogene
retro_ptro_1,
Tupaia belangeri ENSTBEG00000000715 ortholog_one2one 1 retrogene
retro_tbel_364,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2811 92.35 61.51
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Download FASTA sequences of all ENSPTRG00000020786 retrocopies