Parental gene:

ATP6V1B2, ENSPTRG00000020040

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:8:16328670..16353213(+)


>ENSPTRG00000020040
ATGGCGCTGCGGGCGATGCGGGGAATTGTCAACGGGGCCGCACCCGAGCTACCCGTGCCCACCGGTGGGCCGGCGGTGGG
AGCTCGGGAGCAGGCGCTGGCAGTCAGTCGGAACTACCTCTCCCAGCCTCGCCTCACATACAAGACAGTATCTGGAGTCA
ATGGTCCACTAGTGATCTTAGATCATGTTAAGTTTCCCAGGTATGCTGAAATTGTCCATTTGACCTTACCAGATGGCACA
AAGAGAAGTGGGCAAGTTCTGGAAGTTAGTGGTTCCAAGGCAGTAGTTCAGGTATTTGAAGGGACTTCAGGTATAGATGC
TAAGAAAACGTCCTGTGAGTTTACTGGGGATATTCTCCGAACACCGGTGTCTGAGGATATGCTTGGTCGGGTATTCAATG
GATCGGGAAAACCCATTGACAGAGGTCCTGTTGTACTGGCCGAAGACTTCCTTGATATCATGGGTCAGCCAATCAACCCT
CAATGTCGAATCTACCCAGAGGAAATGATTCAGACTGGCATTTCGGCCATCGATGGGATGAACAGTATTGCTAGGGGGCA
GAAAATTCCTATCTTCTCTGCTGCTGGGCTACCGCACAATGAGATTGCAGCTCAGATCTGTCGCCAGGCTGGTTTGGTAA
AGAAATCCAAAGATGTAGTAGACTACAGTGAGGAAAATTTTGCAATTGTATTTGCTGCTATGGGTGTAAACATGGAAACT
GCCCGGTTCTTCAAATCTGACTTTGAAGAAAATGGCTCAATGGACAATGTCTGCCTCTTTTTGAACTTGGCTAATGACCC
AACCATTGAGCGAATTATCACTCCTCGCCTGGCTCTAACCACAGCTGAATTTCTGGCGTACCAATGTGAGAAACATGTAT
TGGTTATTCTAACAGACATGAGTTCTTATGCTGAAGCACTTCGAGAGGTTTCAGCAGCCAGGGAAGAGGTACCTGGTCGA
CGAGGTTTTCCAGGTTACATGTATACAGATTTAGCCACGATATATGAACGCGCTGGGCGAGTGGAAGGGAGAAACGGCTC
GATTACTCAAATCCCTATTCTAACCATGCCTAATGATGATATCACTCACCCCATCCCGGACTTGACTGGCTACATTACAG
AGGGGCAGATCTATGTGGACAGACAGCTGCACAACAGACAGATTTATCCACCTATCAATGTGCTGCCCTCACTATCACGG
TTAATGAAGTCTGCTATTGGAGAAGGGATGACCAGGAAGGATCATGCCGATGTATCTAACCAGCTATATGCGTGCTATGC
TATTGGGAAGGATGTGCAAGCCATGAAAGCTGTCGTTGGAGAAGAAGCCCTTACCTCAGATGATCTTCTCTACTTGGAAT
TTCTGCAGAAGTTTGAGAGGAACTTCATTGCTCAGGGTCCTTACGAAAATCGCACTGTCTTTGAGACTTTGGACATTGGC
TGGCAGCTACTCCGAATCTTCCCCAAAGAAATGCTGAAGAGAATCCCTCAGAGCACCCTCAGCGAATTTTACCCTCGAGA
CTCTGCAAAGCATTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 313 .37 RPM
SRP007412_cerebellum 278 .61 RPM
SRP007412_heart 28 .77 RPM
SRP007412_kidney 182 .28 RPM
SRP007412_liver 37 .58 RPM
SRP007412_testis 245 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003668 ortholog_one2one 1 retrogene
retro_chof_2287,
Homo sapiens ENSG00000147416 ortholog_one2one 1 retrogene
retro_hsap_4308,
Gorilla gorilla ENSGGOG00000003888 ortholog_one2one 1 retrogene
retro_ggor_2879,
Microcebus murinus ENSMICG00000001791 ortholog_one2one 1 retrogene
retro_mmur_854,
Nomascus leucogenys ENSNLEG00000000794 ortholog_one2one 1 retrogene
retro_nleu_1460,
Tarsius syrichta ENSTSYG00000010477 ortholog_one2one 1 retrogene
retro_tsyr_2096,
Tursiops truncatus ENSTTRG00000013650 ortholog_one2one 1 retrogene
retro_ttru_1845,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2917 70.57 51.27
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Download FASTA sequences of all ENSPTRG00000020040 retrocopies