Parental gene:

ZDHHC4, ENSPTRG00000018915

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:7:4794933..4806575(-)


>ENSPTRG00000018915
ATGGACTTTCTGGTCCTCTTCTTGTTCTACCTGGCTTCGGTGCTGATGGGTCTTGTTCTTATCTGCGTCTGCTCGAAAAC
CCATAGCTTGAAAGGCCTGGCCAGGGGAGGAGCACAGATATTTTCCTGTATAATTCCAGAATGTCTTCAGAGAGCCGTGC
ATGGATTGCTTCATTACCTTTTCCATACGAGAAACCACACCTTCATTGTCCTGCACCTGGTCTTGCAAGGGATGGTTTAT
ACTGAGTACACCTGGGAAGTATTTGGCTACTGTCAGGAGCTGGAGTTCTCCTTGTATTACCTTCTTCTGCCCTATCTGCT
GCTAGTTGTAAACCTGTTTTTTTTCACCCTGACTTGTGTAACCAATCCTGGCATTATAACAAAAGCAAATGAATTATTAT
TTCTTCATGTTTATGAATTTGATGAAGTGATGTTTCCAAAGAACGTGAGGTGCTCTACTTGTGATTTAAGGAAACCAGCT
CGATCCAAGCACTGCAGTGTGTGTAACTGGTGTGTGCACCGTTTCGACCATCACTGTGTTTGGGTGAACAACTGCATCGG
GGCCTGGAACATCAGGTACTTCCTCATCTACCTCTTGACCTTGACGGCCTCGGCTGCCACCGTCGCCATTGTGAGCACCA
CTTTTCTGGTCCACTTGGTGGTGATGTCAGATCTATACCAGGAGACTTACATCGATGACCTTGGACACCTCCGTGTTATG
GACACGGTCTTTCTTATTCAGTACCTGTTCCTGACTTTTCCACGGATTGTCTTCATGCTGGGCTTTGTCGTGGTCCTGAG
CTTCCTCCTGGGTGGCTACCTGTTGTTTGTCCTGTATCTGGCGGCCACCAACCAGACTACTAACGAGTGGTACAGAGGTG
ACTGGGCCTGGTGCCAGCGTTGTCCCCTTGTGGCCTGGCCTCCATCAGCAGAGCCCCAAGTCCACCGGAACATTCACTCC
CACGGGCTTCGGAGCAACCTTCAAGAGATCTTTCTACCTGCCTTTCCATGTCATGAGAGGAAGAAACAAGAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .64 RPM
SRP007412_cerebellum 14 .73 RPM
SRP007412_heart 10 .43 RPM
SRP007412_kidney 35 .96 RPM
SRP007412_liver 22 .68 RPM
SRP007412_testis 96 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009547 ortholog_one2one 1 retrogene
retro_btau_643,
Dasypus novemcinctus ENSDNOG00000009165 ortholog_one2one 1 retrogene
retro_dnov_2610,
Homo sapiens ENSG00000136247 ortholog_one2one 1 retrogene
retro_hsap_1193,
Macaca mulatta ENSMMUG00000015545 ortholog_one2one 1 retrogene
retro_mmul_1283,
Nomascus leucogenys ENSNLEG00000015607 ortholog_one2one 1 retrogene
retro_nleu_2081,
Pongo abelii ENSPPYG00000017352 ortholog_one2one 1 retrogene
retro_pabe_993,
Pteropus vampyrus ENSPVAG00000016104 ortholog_one2one 2 retrogenes
retro_pvam_1175, retro_pvam_758,
Ictidomys tridecemlineatus ENSSTOG00000011605 ortholog_one2one 1 retrogene
retro_itri_1054,
Tursiops truncatus ENSTTRG00000005001 ortholog_one2one 1 retrogene
retro_ttru_179,
Vicugna pacos ENSVPAG00000011480 ortholog_one2one 1 retrogene
retro_vpac_177,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3038 70.45 75.87
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Download FASTA sequences of all ENSPTRG00000018915 retrocopies