Parental gene:

BCLAF1, ENSPTRG00000018635

Aliases:None
Description:BCL2-associated transcription factor 1 [Source:HGNC Symbol;Acc:16863]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:6:137605220..137638271(-)


>ENSPTRG00000018635
ATGGGTCGCTCCAATTCTAGATCACATTCTTCAAGGTCAAAGTCTAGATCACAGTCTAGTTCTCGATCAAGATCAAGATC
TCATTCTAGAAAGAAGCGATACAGTTCTAGGTCTCGTTCCAGAACATATTCAAGGTCTCGTAGTAGAGATCGTATGTATT
CTAGAGATTATCGTCGCGATTACAGAAATAATAGAGGAATGAGACGACCTTATGGGTACAGAGGAAGGGGTAGAGGGTAT
TATCAAGGAGGAGGAGGTAGATATCATCGAGGTGGTTATAGACCTGTCTGGAATAGAAGGCACTCTAGGAGTCCTAGACG
AGGTCGTTCACGTTCCAGGAGTCCAAAAAGAAGATCCGTTTCTTCTCAAAGATCCAGAAGCAGATCTCGCCGGTCATATA
GATCTTCTAGGTCTCCAAGATCATCCTCTTCTCGTTCTTCATCCCCATATAGCAAATCTCCTGTTTCTAAAAGACGAGGG
TCTCAGGAAAAACAAACCAAAAAAGCTGAAGGGGAACCCCAAGAAGAGAGTCCGTTGAAAAGTAAATCACAGGAGGAACC
GAAAGATACATTTGAACATGACCCATCTGAGTCTATCGATGAATTTAATAAGTCATCAGCCACATCCGGTGATATTTGGC
CTGGCCTTTCAGCTTATGATAATAGTCCTAGATCACCCCATAGTCCTTCACCTATTGCTACACCACCTAGTCAGAGTTCA
TCTTGCTCTGATGCTCCCATGCTCAGTACAGTTCACTCTGCAAAAAATACTCCTTCTCAGCATTCACATTCCATTCAGCA
TAGTCCTGAAAGGTCTGGGTCTGGTTCTGTTGGAAATGGATCTAGTCGATACAGTCCTTCTCAGAATAGTCCAATTCATC
ACATCCCTTCACGAAGAAGTCCTGCAAAGACAATCGCACCACAGAATGCTCCAAGAGATGAGTCTAGGGGCCGGTCCTCA
TTTTATCCTGATGGTGGAGATCAGGAAACTGCAAAGACTGGGAAGTTCTTAAAAAGGTTCACAGATGAAGAGTCTAGAGT
ATTCCTGCTTGATAGGGGTAATACCAGGGATAAAGAGGCTTCAAAAGAGAAAGGATCAGAGAAAGGGAGGGCAGAGGGAG
AATGGGAAGATCAGGAAGCTCTAGATTACTTCAGTGATAAAGAGTCTGGAAAACAAAAGTTTAATGATTCAGAAGGGGAT
GACACAGAGGAGACAGAGGATTATAGACAGTTTAGGAAGTCAGTCCTCGCAGATCAGGGTAAAAGTTTTGCTACTGCATC
TCACCGGAATACTGAGGAGGAAGGACTCAAGTACAAGTCCAAAGTTTCACTGAAAGGCAGTAGAGAAAGTGATGGATTTA
GAGAAGAAAAAAATTATAAACTTAAAGAGACTGGATATGTAGTGGAAAGGCCTAGCACTACAAAAGATAAGCACAAAGAA
GAAGACAAAAATTCTGAAAGAATAACAGTAAAGAAAGAAACTCAGTCACCTGAGCAGGTAAAGTCTGAAAAGCTCAAAGA
CCTCTTTGATTACAGTCCCCCTCTACACAAGAATCTGGATGCACGAGAAAAGTCTACCTTCAGAGAGGAAAGCCCACTTA
GGATCAAAATGATAGCGAGTGATTCTCACCGTCCTGAAGTCAAACTCAAAATGGCACCCGTTCCTCTTGATGATTCTAAC
AGACCTGCTTCCTTGACTAAAGACAGGCTGCTTGCTAGTACACTTGTCCATTCTGTCAAGAAGGAGCAAGAATTCCGATC
CATCTTTGACCACATTAAGTTGCCACAGGCCAGCAAAAGCACTTCAGAGTCATTTATTCAACACATTGTGTCCTTGGTTC
ATCATGTTAAAGAGCAATACTTCAAGTCAGCTGCAATGACCCTAAACGAGCGGTTCACTTCGTATCAGAAAGCCACTGAA
GAACATAGTACTCGGCAAAAGAGCCCTGAAATACACAGGAGAATTGACATCTCACCAAGTACCCTGAGGAAGCATACCCG
TTTAGCAGGGGAAGAGAGAGTTTTTAAAGAAGAAAATCAAAAGGGAGATAAAAAATTAAGGTGTGACTCTGCTGACCTTC
GGCATGACATTGATCGCCGTAGAAAAGAAAGAAGTAAAGAACGGGGAGATTCCAAGGGCTCCAGGGAATCCAGTGGATCA
AGAAAGCAGGAAAAAACTCCAAAAGATTACAAGGAATACAAATCTTACAAAGATGACAGTAAACATAAAAGAGAGCAAGA
TCATTCTCGATCTTCATCGTCTTCAGCATCGCCTTCTTCTCCCAGTTCTCGAGAAGAAAAGGAGAGTAAGAAGGAAAGAG
AAGAAGAATTTAAAACTCACCATGAAATGAAAGAATACTCAGGCTTTGCAGGAGTTAGCCGACCACGAGGAACCTTTTTT
CGAATTAGAGGCAGAGGAAGAGCCAGAGGAGTTTTTGCTGGGACAAATACTGGTCCAAACAACTCAAATACTACTTTTCA
AAAGAGACCGAAGGAAGAGGAATGGGATCCAGAATATACCCCAAAGAGCAAGAAGTACTTCTTGCATGACGACAGAGATG
ATGGTGTGGATTATTGGGCCAAAAGAGGAAGAGGTCGTGGTACTTTTCAACGTGGCAGAGGGCGCTTTAACTTCAAAAAA
TCAGGTAGCAGTCCTAAATGGACTCATGACAAATACCAAGGGGATGGGATTGTTGAAGATGAAGAAGAGACCATGGAAAA
TAATGAAGAAAAGAAGGACAGACGCAAGGAAGAAAAGGAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 75 .86 RPM
SRP007412_cerebellum 148 .02 RPM
SRP007412_heart 77 .94 RPM
SRP007412_kidney 60 .15 RPM
SRP007412_liver 41 .47 RPM
SRP007412_testis 115 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000027614 ortholog_one2one 1 retrogene
retro_fcat_978,
Homo sapiens ENSG00000029363 ortholog_one2one 1 retrogene
retro_hsap_3364,
Gorilla gorilla ENSGGOG00000001824 ortholog_one2one 1 retrogene
retro_ggor_2279,
Macaca mulatta ENSMMUG00000003710 ortholog_one2one 1 retrogene
retro_mmul_2102,
Pongo abelii ENSPPYG00000017032 ortholog_one2one 1 retrogene
retro_pabe_2767,
Pan troglodytes ENSPTRG00000000535 within_species_paralog 1 retrogene
retro_ptro_1771,
Tupaia belangeri ENSTBEG00000014886 ortholog_one2one 1 retrogene
retro_tbel_628,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2287 92.44 88.70
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Download FASTA sequences of all ENSPTRG00000018635 retrocopies