Parental gene: | FAM54A, ENSPTRG00000018634 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 6:137578805..137598534(-) |
>ENSPTRG00000018634
ATGTCTCTCATACTGAATATCTTAAGAGAGATGCTGGAATATTTTGGCGTTCCTGTAGAACAGGTTTTGCTGATTTGGGA
AAATAAAGACTATGGATCAACTAGGAGTATTGTTCGTATTATTGGGAAAATGCTTCCACTGGAACCTTGTCGAAGACCTA
ATTTTGAGTTGATCCCGCTCTTGAACTCTGTAGACTCGGATAATTGTGGATCTATGGTTCCATCTTTTGCTGATATTTTG
TATGTGGCAAATGATGAAGAAGCCAGTTATCTCAGATTTCGAAATAGTATATGGAAAAATGAAGAAGAGAAAGTGGAAAT
TTTTCATCCTTTGCGACTAGTTCGGGATCCACTGTCACCTGCTGTAAGACAGAAAGAAACAGTGAAAAATGATCTGCCTG
TAAATGAAGCTACAATTAGAAAAATAGCTGCCCTTGAAAATGAGCTGACTTTTCTTCGCTCTCAGATTGCAGCAATTGTG
GAAATGCAGGAACTGAAAAATAGTACAAATTCTAGTTCCTTTGGCTTGAGTGACGAGCACATTAGTTTGGGTCAGTTGTC
ATCGTCGCGGGCTGCCCATCCGAGTGTGGAGCCCGATCGGTTTCCAGGTTCAGTGCTTTCTCCTCCTCCTCCACCACCAC
CACTTCCTCCTCAGTCTTCATCTCTCCAGCCACCGTGTTTTCCTCCCATACAACCAGGATCTAATAATATTTGTGACTCG
GATAATCCAGCAACTGAAATGAGCAAACAGAACCCGGCTGCTAATAAGACCAATTATAGTCATCATTCAAAAAGCCAGAG
AAATAAAGATATTCCAAACATGTTGGACGTTCTAAAGGATATGAATAAGGTTAAGCTTCGTGCAATTGAGCGGTCACCTG
GCGGTAGACCCATTCATAAGAGGAAAAGACAGAATTCACATTGGGATCCAGTTTCTTTAATATCTCATGCACTTAAACAG
AAATTTGCATTTCAAGAAGATGATTCTTTTGAGAAAGAGAATAGATCTTGGGAATCTTCCCCATTTTCTAGTCCAGAAAC
TTCAAGGTTTGGACATCACATTTCACAGTCAGAAGGACAGCGAACTAAAGAAGAAATGGTCAACACAAAAGCTGTTGACC
AAGGTATCAGCAACACAAGCCTTCTAAACTCAAGGATTTAA
ATGTCTCTCATACTGAATATCTTAAGAGAGATGCTGGAATATTTTGGCGTTCCTGTAGAACAGGTTTTGCTGATTTGGGA
AAATAAAGACTATGGATCAACTAGGAGTATTGTTCGTATTATTGGGAAAATGCTTCCACTGGAACCTTGTCGAAGACCTA
ATTTTGAGTTGATCCCGCTCTTGAACTCTGTAGACTCGGATAATTGTGGATCTATGGTTCCATCTTTTGCTGATATTTTG
TATGTGGCAAATGATGAAGAAGCCAGTTATCTCAGATTTCGAAATAGTATATGGAAAAATGAAGAAGAGAAAGTGGAAAT
TTTTCATCCTTTGCGACTAGTTCGGGATCCACTGTCACCTGCTGTAAGACAGAAAGAAACAGTGAAAAATGATCTGCCTG
TAAATGAAGCTACAATTAGAAAAATAGCTGCCCTTGAAAATGAGCTGACTTTTCTTCGCTCTCAGATTGCAGCAATTGTG
GAAATGCAGGAACTGAAAAATAGTACAAATTCTAGTTCCTTTGGCTTGAGTGACGAGCACATTAGTTTGGGTCAGTTGTC
ATCGTCGCGGGCTGCCCATCCGAGTGTGGAGCCCGATCGGTTTCCAGGTTCAGTGCTTTCTCCTCCTCCTCCACCACCAC
CACTTCCTCCTCAGTCTTCATCTCTCCAGCCACCGTGTTTTCCTCCCATACAACCAGGATCTAATAATATTTGTGACTCG
GATAATCCAGCAACTGAAATGAGCAAACAGAACCCGGCTGCTAATAAGACCAATTATAGTCATCATTCAAAAAGCCAGAG
AAATAAAGATATTCCAAACATGTTGGACGTTCTAAAGGATATGAATAAGGTTAAGCTTCGTGCAATTGAGCGGTCACCTG
GCGGTAGACCCATTCATAAGAGGAAAAGACAGAATTCACATTGGGATCCAGTTTCTTTAATATCTCATGCACTTAAACAG
AAATTTGCATTTCAAGAAGATGATTCTTTTGAGAAAGAGAATAGATCTTGGGAATCTTCCCCATTTTCTAGTCCAGAAAC
TTCAAGGTTTGGACATCACATTTCACAGTCAGAAGGACAGCGAACTAAAGAAGAAATGGTCAACACAAAAGCTGTTGACC
AAGGTATCAGCAACACAAGCCTTCTAAACTCAAGGATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .30 RPM |
| SRP007412_cerebellum | 1 .08 RPM |
| SRP007412_heart | 0 .15 RPM |
| SRP007412_kidney | 0 .86 RPM |
| SRP007412_liver | 0 .88 RPM |
| SRP007412_testis | 10 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000000244 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002331 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017453 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014793 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1491 | 67.69 | 50.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000018634 retrocopies