Parental gene: | ORC3, ENSPTRG00000018408 |
| Aliases: | ORC3, ORC3L |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 6:88193891..88270405(+) |
>ENSPTRG00000018408
ATGGCCACGTCCTCGATGTCTAAGGGTTGCTTTGTTTTTAAGCCAAGCTCCAAAAAGAGAAAGATCTCTCTGCCAATAGA
GGACTATTTTAACAAAGGGAAAAATGAGCCTGAGGACAGTAAGCTTCGATTCGAAACTTATCAGTTGATATGGCAGCAGA
TGAAATCTGAAAATGAGCGACTACAAGAGGAATTAAATAAAAACTTGTTTGGCAATCTGATTGAATTTCTGCAAAAATCA
CATTCTGGATTCCAGAAGAATTCAAGAGACTTGGGCGGTCAAATAAAACTCAGAGAAATTCCAACTGCTGCTCTTGTTCT
TGGTGTGAATGTCACAGATCATGATTTGACATTCAGAAGTCTAACAGAGGCCCTTCAGAATAATGTCACACCATATGTAG
TCTCATTGCAAGCTAAAGATTGTCCAGATATGAAACATTTTTTGCAAAAGTTGATCTCACAGTTGATGGACTGCTGTGTA
GATATAAAATCCAAAGAGGAGGAAAGTGTTCACGTCACCCAAAGAAAGACACATTATTCAATGGATTCACTTTCCAGTTG
GTATATGACTGTCACACAGAAGACGGACCCAAAAATGCTAAGCAAAAAAAGGACTACTTCTAGCCAATGGCAGTCTCCTC
CTGTTGTCGTTATCTTGAAGGATATGGAAAGCTTTGCCACAAAAGTACTACAAGACTTCATAATTATCAGCAGTCAACAT
CTCCATGAATTTCCACTAATACTCATTTTTGGAATAGCCACATCTCCTATTATCATCCACCGATTGCTTCCTCATGCAGT
ATCATCTCTATTGTGCATAGAACTGTTCCAATCTTTGTCTTGTAAGGAGCACCTGACTACGGTACTCGATAAGCTACTTC
TTACAACTCAGTTTCCCTTTAAAATAAATGAAAAAGTATTACAGGTTCTGACCAACATCTTTTTGTATCATGATTTCTCA
GTTCAAAACTTTATAAAAGGACTTCAGCTTTCTCTATTAGAGCATTTCTATTCCCAGCCCTTAAGTGTCCTGTGCTGTAA
TCTTCCAGAAGCCAAAAGAAGAATAAATTTTTTATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTTTTAGGA
GGTACGTGGAAAAGCAAGCTTCAGAAAAGCAAGTTGCACTCTTGACCAATGAGAGATATTTGAAGGAGGAAACACAATTA
TTACTAGAAAACCTGCATGTTTATCATATGAATTACTTCCTGGTTTTGAGATGTCTTCATAAGTTCACCTCTTCTCTTCC
CAAGTATCCACTAGGTCGACAGATCAGAGAGTTGTACTGTACATGTTTAGAAAAGAACATATGGGATTCAGAGGAGTATG
CATCAGTCTTGCAGCTGCTGAGGATGTTGGCAAAGGATGAACTGATGACCATACTTGAGAAATGTTTCAAGGTTTTTAAG
TCTTATTGTGAAAACCACCTTGGCAGCACAGCTAAGAGAATAGAGGAGTTCCTGGCCCAGTTTCAGAGCCTCGATGAAAC
CGAAGAGGAAGAAGATGCTTCTGGGTCACAGCCAAAGGGGCTTCAGAAGACAGACCTCTATCATCTTCAGAAGTCCTTAT
TGGAAATGAAGGAGTTAAGAAGAAGTAAGAAGCAAACCAAATTTGAAGTACTCAGAGAAAATGTTGTGAACTTCATTGAC
TGTCTAGTGAGAGAATACCTTCTGCCTCCTGAGACACAGCCTCTCCATGAGGTGGTGTACTTCAGTGCTGCCCATGCCCT
TCGTGAGCATTTAAATGCTGCTCCGCGAATTGCCCTCCATACTGCACTCAACAATCCTTACTATTATCTCAAGAATGAAG
CACTGAAAAGCGAAGAAGGCTGCATTCCGAATATCGCCCCAGACATCTGCATAGCATACAAACTGCACCTAGAGTGTAGC
AGGCTCATCAACCTCGTGGACTGGTCAGAGGCTTTTGCAACAGTTGTGACAGCTGCTGAAAAAATGGATGCAAATTCTGC
AACCTCAGAAGAAATGAATGAAATTATCCATGCTCGGTTTATTAGAGCTGTTTCTGAACTAGAACTTTTAGGATTTATAA
AACCTACCAAACAGAAGACTGACCATGTGGCAAGACTAACATGGGGAGGCTGCTAG
ATGGCCACGTCCTCGATGTCTAAGGGTTGCTTTGTTTTTAAGCCAAGCTCCAAAAAGAGAAAGATCTCTCTGCCAATAGA
GGACTATTTTAACAAAGGGAAAAATGAGCCTGAGGACAGTAAGCTTCGATTCGAAACTTATCAGTTGATATGGCAGCAGA
TGAAATCTGAAAATGAGCGACTACAAGAGGAATTAAATAAAAACTTGTTTGGCAATCTGATTGAATTTCTGCAAAAATCA
CATTCTGGATTCCAGAAGAATTCAAGAGACTTGGGCGGTCAAATAAAACTCAGAGAAATTCCAACTGCTGCTCTTGTTCT
TGGTGTGAATGTCACAGATCATGATTTGACATTCAGAAGTCTAACAGAGGCCCTTCAGAATAATGTCACACCATATGTAG
TCTCATTGCAAGCTAAAGATTGTCCAGATATGAAACATTTTTTGCAAAAGTTGATCTCACAGTTGATGGACTGCTGTGTA
GATATAAAATCCAAAGAGGAGGAAAGTGTTCACGTCACCCAAAGAAAGACACATTATTCAATGGATTCACTTTCCAGTTG
GTATATGACTGTCACACAGAAGACGGACCCAAAAATGCTAAGCAAAAAAAGGACTACTTCTAGCCAATGGCAGTCTCCTC
CTGTTGTCGTTATCTTGAAGGATATGGAAAGCTTTGCCACAAAAGTACTACAAGACTTCATAATTATCAGCAGTCAACAT
CTCCATGAATTTCCACTAATACTCATTTTTGGAATAGCCACATCTCCTATTATCATCCACCGATTGCTTCCTCATGCAGT
ATCATCTCTATTGTGCATAGAACTGTTCCAATCTTTGTCTTGTAAGGAGCACCTGACTACGGTACTCGATAAGCTACTTC
TTACAACTCAGTTTCCCTTTAAAATAAATGAAAAAGTATTACAGGTTCTGACCAACATCTTTTTGTATCATGATTTCTCA
GTTCAAAACTTTATAAAAGGACTTCAGCTTTCTCTATTAGAGCATTTCTATTCCCAGCCCTTAAGTGTCCTGTGCTGTAA
TCTTCCAGAAGCCAAAAGAAGAATAAATTTTTTATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTTTTAGGA
GGTACGTGGAAAAGCAAGCTTCAGAAAAGCAAGTTGCACTCTTGACCAATGAGAGATATTTGAAGGAGGAAACACAATTA
TTACTAGAAAACCTGCATGTTTATCATATGAATTACTTCCTGGTTTTGAGATGTCTTCATAAGTTCACCTCTTCTCTTCC
CAAGTATCCACTAGGTCGACAGATCAGAGAGTTGTACTGTACATGTTTAGAAAAGAACATATGGGATTCAGAGGAGTATG
CATCAGTCTTGCAGCTGCTGAGGATGTTGGCAAAGGATGAACTGATGACCATACTTGAGAAATGTTTCAAGGTTTTTAAG
TCTTATTGTGAAAACCACCTTGGCAGCACAGCTAAGAGAATAGAGGAGTTCCTGGCCCAGTTTCAGAGCCTCGATGAAAC
CGAAGAGGAAGAAGATGCTTCTGGGTCACAGCCAAAGGGGCTTCAGAAGACAGACCTCTATCATCTTCAGAAGTCCTTAT
TGGAAATGAAGGAGTTAAGAAGAAGTAAGAAGCAAACCAAATTTGAAGTACTCAGAGAAAATGTTGTGAACTTCATTGAC
TGTCTAGTGAGAGAATACCTTCTGCCTCCTGAGACACAGCCTCTCCATGAGGTGGTGTACTTCAGTGCTGCCCATGCCCT
TCGTGAGCATTTAAATGCTGCTCCGCGAATTGCCCTCCATACTGCACTCAACAATCCTTACTATTATCTCAAGAATGAAG
CACTGAAAAGCGAAGAAGGCTGCATTCCGAATATCGCCCCAGACATCTGCATAGCATACAAACTGCACCTAGAGTGTAGC
AGGCTCATCAACCTCGTGGACTGGTCAGAGGCTTTTGCAACAGTTGTGACAGCTGCTGAAAAAATGGATGCAAATTCTGC
AACCTCAGAAGAAATGAATGAAATTATCCATGCTCGGTTTATTAGAGCTGTTTCTGAACTAGAACTTTTAGGATTTATAA
AACCTACCAAACAGAAGACTGACCATGTGGCAAGACTAACATGGGGAGGCTGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 13 .96 RPM |
| SRP007412_cerebellum | 18 .14 RPM |
| SRP007412_heart | 8 .39 RPM |
| SRP007412_kidney | 12 .84 RPM |
| SRP007412_liver | 7 .23 RPM |
| SRP007412_testis | 30 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000000730 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000135336 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000002821 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012990 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016830 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_555 | 88.19 | 80.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000018408 retrocopies