Parental gene:

HNRNPAB, ENSPTRG00000017601

Aliases:None
Description:Heterogeneous nuclear ribonucleoprotein A/B [Source:UniProtKB/TrEMBL;Acc:K7CPF8]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:5:179315844..179322177(+)


>ENSPTRG00000017601
CCGAGCGGGAATCAGAACGGCGCCGAGGGCGACCAGATCAACGCCAGCAAGAACGAGGAGGACGCGGGAAAAATGTTCGT
TGGTGGCCTGAGCTGGGATACTAGCAAAAAAGATTTAAAAGACTATTTTACTAAATTTGGAGAGGTCGTTGACTGTACAA
TAAAAATGGATCCCAACACTGGACGGTCAAGAGGGTTTGGGTTTATCCTGTTCAAAGATGCAGCCAGTGTGGAGAAGGTC
CTAGACCAGAAGGAGCACAGGCTGGATGGCCGTGTCATTGACCCTAAAAAGGCCATGGCTATGAAGAAGGACCCGGTGAA
GAAAATCTTCGTTGGGGGTCTGAATCCTGAAGCCACTGAGGAAAAGATCAGGGAGTACTTTGGCGAGTTTGGGGAGATTG
AGGCCATTGAATTGCCAATGGATCCAAAGTTGAACAAAAGACGAGGTTTTGTGTTTATCACCTTTAAAGAAGAAGAACCC
GTGAAGAAGGTTCTGGAGAAAAAGTTCCATACTGTCAGTGGAAGCAAGTGTGAGATCAAGGTGGCCCAGCCCAAAGAAGT
CTATCAGCAGCAGCAGTATGGCTCTGGGGGCCGTGGAAACCGCAACCGAGGGAACCGAGGCAGCGGAGGTGGTGGTGCTG
GTGGAGGTCAGAGTCAGAGTTGGAATCAGGGCTACGGCAACTACTGGAACCAGGGCTACGGCTACCAGCAGGGCTACGGG
CCTGGCTATGGCGGCTACGACTACTCGCCCTATGGCTATTACGGCTACGGCCCCGGCTACGACTACAGTCAGGGTAGTAC
AAACTACGGCAAGAGCCAGCGACGTGGTGGCCATCAGAATAACTACAAGCCATACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 23 .88 RPM
SRP007412_cerebellum 40 .26 RPM
SRP007412_heart 40 .28 RPM
SRP007412_kidney 51 .94 RPM
SRP007412_liver 153 .98 RPM
SRP007412_testis 38 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000000241 ortholog_one2one 2 retrogenes
retro_cfam_408, retro_cfam_412,
Homo sapiens ENSG00000197451 ortholog_one2one 1 retrogene
retro_hsap_962,
Loxodonta africana ENSLAFG00000001189 ortholog_one2one 1 retrogene
retro_lafr_405,
Macropus eugenii ENSMEUG00000007909 ortholog_one2one 2 retrogenes
retro_meug_169, retro_meug_246,
Myotis lucifugus ENSMLUG00000003380 ortholog_one2one 2 retrogenes
retro_mluc_2024, retro_mluc_2138,
Nomascus leucogenys ENSNLEG00000015775 ortholog_one2one 1 retrogene
retro_nleu_1611,
Oryctolagus cuniculus ENSOCUG00000026424 ortholog_one2one 3 retrogenes
retro_ocun_1800, retro_ocun_1811, retro_ocun_950,
Otolemur garnettii ENSOGAG00000030251 ortholog_one2one 2 retrogenes
retro_ogar_3509, retro_ogar_385,
Pongo abelii ENSPPYG00000016107 ortholog_one2one 1 retrogene
retro_pabe_821,
Pan troglodytes ENSPTRG00000012676 other_paralog 5 retrogenes
retro_ptro_1059, retro_ptro_2430, retro_ptro_2966, retro_ptro_683, retro_ptro_872,
Pan troglodytes ENSPTRG00000016215 within_species_paralog 1 retrogene
retro_ptro_3116,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_666 86.07 70.53
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Download FASTA sequences of all ENSPTRG00000017601 retrocopies