Parental gene:

PFDN1, ENSPTRG00000017310

Aliases:None
Description:prefoldin subunit 1 [Source:HGNC Symbol;Acc:8866]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:5:140967296..141024571(-)


>ENSPTRG00000017310
ATGGCCGCCCCCGTGGATCTAGAGCTGAAGAAGGCCTTCACAGAGCTTCAAGCCAAAGTTATTGACACTCAACAGAAGGT
GAAGCTCGCAGACATACAGATTGAACAGCTAAACAGAACGAAAAAGCATGCACATCTTACAGATACAGAGATCATGACTT
TGGTAGATGAGACTAACATGTATGAAGGTGTAGGAAGAATGTTTATTCTTCAGTCCAAGGAAGCAATTCACAATCAGCTG
TTAGAGAAGCAGAAAATAGCAGAAGAAAAAATTAAAGAACTAGAACAGAAAAAGTCCTACCTGGAGCGAAGCGTTAAGGA
AGCTGAGGACAACATCCGGGAGATGCTGATGGCACGAAGGGCCCAGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 50 .83 RPM
SRP007412_cerebellum 23 .80 RPM
SRP007412_heart 25 .97 RPM
SRP007412_kidney 27 .38 RPM
SRP007412_liver 9 .79 RPM
SRP007412_testis 10 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005742 possible_ortholog 8 retrogenes
retro_cfam_1742, retro_cfam_1893, retro_cfam_1943, retro_cfam_251, retro_cfam_276, retro_cfam_417, retro_cfam_788, retro_cfam_997,
Equus caballus ENSECAG00000011843 possible_ortholog 1 retrogene
retro_ecab_53,
Echinops telfairi ENSETEG00000019281 ortholog_one2one 1 retrogene
retro_etel_1629,
Homo sapiens ENSG00000113068 ortholog_one2one 1 retrogene
retro_hsap_2606,
Macropus eugenii ENSMEUG00000002726 ortholog_one2one 3 retrogenes
retro_meug_380, retro_meug_686, retro_meug_801,
Otolemur garnettii ENSOGAG00000003376 possible_ortholog 6 retrogenes
retro_ogar_1025, retro_ogar_1216, retro_ogar_1412, retro_ogar_2217, retro_ogar_3129, retro_ogar_89,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1757 95.65 74.59
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Download FASTA sequences of all ENSPTRG00000017310 retrocopies