Parental gene: | C5orf15, ENSPTRG00000017234 |
| Aliases: | None |
| Description: | chromosome 5 open reading frame 15 [Source:HGNC Symbol;Acc:20656] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 5:134613603..134626864(-) |
>ENSPTRG00000017234
ATGGCCGCTGCCGTCCCGAAGAGGATGAGGGGGCCAGCACAAGCGAAACTGCTGCCCGGGTCGGCCATCCAAGCCCTTGT
GGGGTTGGCGCGGCCGTTGGTCTTGGCGCTCCTGCTTGTGTCCGCCGCTCTATCCAGTGTTGTATCACGGACTGATTCAC
CGAGCCCAACCGTACTCAACTCACATATTTCTACCCCAAATGTGAATGCTTTAACACATGAAAACCAAACCAAACCTTCT
ATTTCCCAAATCAGCACCACCCTCCCTCCCACGACGAGTACCAAGAAAAGTGGAGGAGCATCTGTGGCCCCTCATCCCTC
GCCTACTCCTCTGTCTCAAGAGGAAGCTGATAACAATGAAGATCCTAGTATAGAGGAGGAGGATCTTCTCACGCTGAACA
GTTCTCCATCCACAGCCAAAGACACTCTAGACAATGGCGATTATGGAGAACCAGACTATGACTGGACCACGGGCCCCAGG
GATGACGATGAGTCTGATGACACCTTGGAAGAAAACAGGGGTTACATGGAAATTGAACAGTCAGTGAAATCTTTTAAGAT
GCCATCCTCAAATATAGAAGAGGAAGACAGCCATTTCTTTTTTCATCTTATTATTTTTGCTTTTTGCATTGCTGTTGTTT
ACATTACATATCACAACAAAAGGAAGATTTTTCTTCTGGTTCAAAGCAGGAAATGGCGTGATGGCCTTTGTTCCAAAACA
GTGGAATACCATCGCCTAGATCAGAATGTTAATGAGGCAATGCCTTCTTTGAAGATTACCAATGATTATATTTTTTAA
ATGGCCGCTGCCGTCCCGAAGAGGATGAGGGGGCCAGCACAAGCGAAACTGCTGCCCGGGTCGGCCATCCAAGCCCTTGT
GGGGTTGGCGCGGCCGTTGGTCTTGGCGCTCCTGCTTGTGTCCGCCGCTCTATCCAGTGTTGTATCACGGACTGATTCAC
CGAGCCCAACCGTACTCAACTCACATATTTCTACCCCAAATGTGAATGCTTTAACACATGAAAACCAAACCAAACCTTCT
ATTTCCCAAATCAGCACCACCCTCCCTCCCACGACGAGTACCAAGAAAAGTGGAGGAGCATCTGTGGCCCCTCATCCCTC
GCCTACTCCTCTGTCTCAAGAGGAAGCTGATAACAATGAAGATCCTAGTATAGAGGAGGAGGATCTTCTCACGCTGAACA
GTTCTCCATCCACAGCCAAAGACACTCTAGACAATGGCGATTATGGAGAACCAGACTATGACTGGACCACGGGCCCCAGG
GATGACGATGAGTCTGATGACACCTTGGAAGAAAACAGGGGTTACATGGAAATTGAACAGTCAGTGAAATCTTTTAAGAT
GCCATCCTCAAATATAGAAGAGGAAGACAGCCATTTCTTTTTTCATCTTATTATTTTTGCTTTTTGCATTGCTGTTGTTT
ACATTACATATCACAACAAAAGGAAGATTTTTCTTCTGGTTCAAAGCAGGAAATGGCGTGATGGCCTTTGTTCCAAAACA
GTGGAATACCATCGCCTAGATCAGAATGTTAATGAGGCAATGCCTTCTTTGAAGATTACCAATGATTATATTTTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 12 .78 RPM |
| SRP007412_cerebellum | 18 .21 RPM |
| SRP007412_heart | 15 .27 RPM |
| SRP007412_kidney | 33 .13 RPM |
| SRP007412_liver | 23 .27 RPM |
| SRP007412_testis | 23 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000021947 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008019 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015780 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000012421 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_324 | 88.68 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000017234 retrocopies