Parental gene:

NDUFB5, ENSPTRG00000015649

Aliases:None
Description:Pan troglodytes NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa (NDUFB5), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001071806]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:3:183563295..183583393(+)


>ENSPTRG00000015649
ATGGCGGCCATGAGTTTGTTGCGGCGGGTTTCGGTTACTGCGGTGGCAGCTCTGTCTGGCCGCCCCCTTGGCACTCGCCT
CGGATTTGGGGGCTTCCTCACTCGTGGCTTTCCGAAGGCTGCTGCTCCTGTTCGACACAGTGGAGACCATGGGAAAAGAC
TATTTGTCATCAGACCTTCTAGATTCTATGACAGGCGTTTTTTGAAGTTATTGAGATTCTACATTGCATTAACTGGGATT
CCAGTAGCAATTTTCATAACTCTGGTGAATGTATTCATTGGTCAAGCTGAACTAGCAGAAATTCCAGAAGGCTATGTCCC
AGAACACTGGGAATATTATAAGCATCCCATATCGAGATGGATTGCCCGTAATTTCTATGATAGTCCTGAAAAGATATATG
AAAGAACAATGGCCGTCCTTCAGATTGAAGCTGAAAAGGCTGAATTACGGGTAAAGGAGCTGGAAGTACGAAAATTGATG
CATGTGAGAGGAGATGGACCCTGGTATTACTATGAGACAATTGACAAGGAACTTATTGATCATTCTCCGAAAGCAACTCC
TGACAATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 26 .51 RPM
SRP007412_cerebellum 7 .99 RPM
SRP007412_heart 51 .41 RPM
SRP007412_kidney 36 .80 RPM
SRP007412_liver 14 .11 RPM
SRP007412_testis 28 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002684 ortholog_one2one 1 retrogene
retro_chof_1511,
Equus caballus ENSECAG00000000682 ortholog_one2one 1 retrogene
retro_ecab_235,
Echinops telfairi ENSETEG00000019363 ortholog_one2one 1 retrogene
retro_etel_1110,
Homo sapiens ENSG00000136521 ortholog_one2one 2 retrogenes
retro_hsap_3127, retro_hsap_4879,
Macropus eugenii ENSMEUG00000014166 ortholog_one2one 1 retrogene
retro_meug_1852,
Myotis lucifugus ENSMLUG00000000999 ortholog_one2one 1 retrogene
retro_mluc_2181,
Macaca mulatta ENSMMUG00000009746 ortholog_one2one 1 retrogene
retro_mmul_2619,
Monodelphis domestica ENSMODG00000021300 ortholog_one2one 1 retrogene
retro_mdom_1105,
Nomascus leucogenys ENSNLEG00000005842 ortholog_one2one 2 retrogenes
retro_nleu_2247, retro_nleu_2558,
Pongo abelii ENSPPYG00000014493 ortholog_one2one 2 retrogenes
retro_pabe_3018, retro_pabe_3796,
Pteropus vampyrus ENSPVAG00000004286 ortholog_one2one 1 retrogene
retro_pvam_81,
Sorex araneus ENSSARG00000006918 ortholog_one2one 1 retrogene
retro_sara_200,
Sus scrofa ENSSSCG00000011764 ortholog_one2one 1 retrogene
retro_sscr_193,
Tursiops truncatus ENSTTRG00000008910 ortholog_one2one 3 retrogenes
retro_ttru_1445, retro_ttru_1719, retro_ttru_1755,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3252 69.01 89.95
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Download FASTA sequences of all ENSPTRG00000015649 retrocopies