Parental gene:

EIF2A, ENSPTRG00000015528

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:3:154221162..154259546(+)


>ENSPTRG00000015528
ATGGCGCCGTCCACGCCGCTCTTGACAGTCCGAGGATCAGAAGGACTGTACATGGTGAATGGACCACCACATTTTACAGA
AAGCACAGTGTTTCCAAGGGAATCTGGGAAGAATTGCAAAGTCTATACCTTTAGTAAGGATGGGACCTTGTTTGCCTGGG
GCAATGGAGAAAAAGTAAATATTATCAGTGTCACTAACAAGGGACTACTGCACTCCTTCGACCTCCCGAAGGCAGTTTGC
CTTGAATTCTCACCCAAAAATACTGTCCTGGCAACGTGGCAGCCTTATACTACTTCTAAAGATGGCACAGCTGGGATACC
CAACCTACAACTTTATGATGTGAAAACTGGGACATGTTTGAAATCTTTCATCCAGAAAAAAATGCAAAATTGGTGTCCAT
CCTGGTCAGAAGATGAAACTCTTTGTGCCCGCAGTGTTAACAATGAAGTTCACTTCTTTGAAAACAACAATTTTAACACA
ATTGCAAATAAATTGCATTTGCAAAAAATTAATGATTTTGTATTATCACCTGGACCCCAACCATACAAGGTGGCTGTCTA
TGTTCCAGGAAGTAAAGGTGCACCTTCATTTGTTAGATTATATCAGTACCCCAACTTTGCTGGACCTCATGCAGCTTTAG
CTAATAAAAGTTTCTTTAAGGCAGATAAAGTTACAATGCTGTGGAATAAAAAAGCTACTGCTGTGTTGGTAATAGCTAGC
ACAGATGTTGACAAGACAGGAGCTTCCTACTATGGAGAACAAACTCTACACTACATTGCAACAAATGGAGAAAGTGCTGT
AGTGCAATTACCAAAAAATGGCCCCATATATGATGTAGTTTGGAATTCTAGTTCTACTGAGTTTTGTGCTGTATATGGTT
TTATGCCTGCCAAAGCGACAATTTTCAACTTGAAATGTGATCCTGTATTTGACTTTGGAACTGGTCCTCGTAATGCAGCC
TACTATAGCCCTCATGGACATATATTAGTATTAGCTGGATTTGGAAATCTGAGGGGACAAATGGAAGTGTGGGATGTGAA
AAACTACAAACTTATTTCTAAACCGGTGGCTTCTGATTCTACATATTTTGCTTGGTGCCCGGATGGTGAGCATATTTTAA
CAGCTACATGTGCTCCCAGGTTACGGGTTAATAATGGATACAAAATTTGGCATTATACTGGCTCTATCTTGCACAAGTAT
GATGTGCCATCAAATGCAGAATTATGGCAGGTTTCTTGGCAGCCATTTTTGGATGGAATATTTCCAGCAAAAACAATAAC
TTACCAAGCAGTTCCAAGTGAAGTACCCAATGAGGAACCTAAAGTTGCAACAGCTTATAGACCCCCAGCTTTAAGAAATA
AACCAATCACCAATTCCAAATTGCATGAAGAGGAACCACCTCAGAATATGAAACCACAATCAGGAAACGATAAGCCATTA
TCAAAAACAGCTCTTAAAAATCAAAGGAAGCATGAAGCTAAGAAAGCTGCAAAGCAGGAAGCAAGAAGTGACAAGAGTCC
AGATTTGGCACCTACTCCTGCCCCACAGAGCACACCACGAAACACTGTCTCTCAGTCAATTTCTGGGGACCCTGAGATAG
ACAAAAAAATCAAGAACCTAAAGAAGAAACTGAAAGCAATCGAACAACTGAAAGAACAAGCAGCAACTGGAAAACAGCTA
GAAAAAAATCAGTTGGAGAAAATTCAGAAAGAAACAGCCCTTCTCCAGGAGCTGGAAGATTTGGAATTGGGTATTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 24 .65 RPM
SRP007412_cerebellum 67 .47 RPM
SRP007412_heart 42 .67 RPM
SRP007412_kidney 48 .35 RPM
SRP007412_liver 37 .19 RPM
SRP007412_testis 19 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001199 ortholog_one2one 1 retrogene
retro_cjac_968,
Dasypus novemcinctus ENSDNOG00000014002 ortholog_one2one 1 retrogene
retro_dnov_1148,
Homo sapiens ENSG00000144895 ortholog_one2one 1 retrogene
retro_hsap_565,
Gorilla gorilla ENSGGOG00000015391 ortholog_one2one 1 retrogene
retro_ggor_509,
Loxodonta africana ENSLAFG00000003767 ortholog_one2one 1 retrogene
retro_lafr_502,
Macaca mulatta ENSMMUG00000017696 ortholog_one2one 1 retrogene
retro_mmul_2395,
Nomascus leucogenys ENSNLEG00000003219 ortholog_one2one 1 retrogene
retro_nleu_2213,
Oryctolagus cuniculus ENSOCUG00000016095 ortholog_one2one 3 retrogenes
retro_ocun_1771, retro_ocun_1825, retro_ocun_1861,
Pongo abelii ENSPPYG00000029636 ortholog_one2one 2 retrogenes
retro_pabe_517, retro_pabe_652,
Ictidomys tridecemlineatus ENSSTOG00000003374 ortholog_one2one 1 retrogene
retro_itri_1706,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_423 64.65 87.52
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Download FASTA sequences of all ENSPTRG00000015528 retrocopies